| Annotation |
|---|
| Description | jgi|Araly1|478868|fgenesh2_kg.3__1569__AT3G14440.1 |
| Sequence |
AAACCAACTC TCTCTTCTCT CTTCTCACTT GAACAATAAG AAAAAAAAAA ACAGAGCCTT TACACATCTC AAGATCGAAC CAATTTAATC ACCAAATACT GATTGGACTT TCTTGAAAAC ATGGCTTCTT TCACGGCGAC GGCTGCGGTT TCTCGGAGAT GGGTTGGTGG CAATCATACT CAGCCGCCAT TATCGTCTTC CCAAAGCTCC GACTTCAGTT ATTGTAGCTC CTTACCTATG ACCAGTCGTG TCACACGAAA GCTCAATGTT TCATCTGCGC TTCACACTCC TCCAGCTCTT CATTTCCCTA AGCAATCATC AAACTCTCCC GCCATTGTTG TTAACCCCAA AGCCAAAGAA TCCGACACTA AACAGATGAA TTTGTTCCAG AGAGCGGCGG CGGCAGCTTT GGACGCGGCG GAGGGTTTCC TTGTGAGCCA CGAGAGGCTA CACCCTCTTC CTAAAACGTC TGATCCTAGT GTTCAGATCG CCGGAAATTT TGCTCCGGTG AATGAACAGC CCGTCCGGCG TAATCTTCCG GTGGTCGGAA AAATACCTGA TTCCATCAAA GGAGTGTATG TGCGCAACGG AGCTAACCCA CTTCACGAGC CGGTGACAGG ACACCACTTC TTCGACGGAG ACGGTATGGT TCACGCCGTC AAATTCGAAG ACGGTTCAGC TAGCTACGCT TGCCGGTTTA CTCAGACTAA CCGGTTTGTT CAGGAGCGTG AATTGGGTCG ACCGGTTTTC CCCAAAGCTA TCGGTGAGCT TCACGGCCAC ACCGGTATTG CCCGACTCAT GCTATTCTAC GCCAGAGCTG CAGCCGGTAT AGTCGACCCG GCACACGGAA CCGGTGTAGC CAACGCCGGT TTGGTCTATT TCAACGGCCG GTTATTGGCG ATGTCGGAGG ACGATTTGCC TTACCAAGTT CGGATCACTC CCAGTGGAGA TTTAAAAACC GTTGGTCGGT TCGATTTTGA CGGACAATTG GATTCCACAA TGATTGCCCA CCCGAAAGTC GACCCGGAAT CCGGTGAACT CTTCGCTTTA AGTTACGACG TCGTTTCAAA GCCTTACCTG AAATACTTCC GATTCTCGCC GGACGGAACT AAATCACCGG ACGTCGAGAT TCAGCTTGAT CAGCCGACAA TGATGCACGA TTTCGCGATT ACAGAGAACT TCGTCGTGAT ACCGGACCAG CAAGTCGTTT TCAAGTTGCC GGAGATGATC CGCGGTGGCT CTCCGGTGGT TTACGACAAG AACAAGGTCT CAAGATTCGG AATTTTAGAC AAATACGCCG AAGATTCATC GAATATTAAG TGGATTGATG CGCCTGACTG CTTCTGCTTC CATCTCTGGA ACGCTTGGGA AGAGCCAGAA ACAGAGGAAG TCGTCGTGAT CGGGTCGTGT ATGACTCCAC CAGACTCAAT TTTCAACGAG TCTGACGAGA ATCTCAAGAG TGTCCTCTCT GAAATCCGCC TGAATCTCAA AACCGGTGAA TCAACTCGCC GTCCGATCAT CGCCGACGAA GATCAACAAG TCAACCTCGA AGCAGGGATG GTCAACAGAA ACATGCTCGG CCGGAAAACA AAATTCGCTT ACTTGGCTTT AGCCGAGCCA TGGCCTAAAG TCTCAGGATT CGCTAAAGTT GATCTCACTA CCGGAGAAGT CAAGAAACAT CTCTACGGCG ATAACCGTTA CGGAGGAGAG CCTCTGTTTC TCCCCGGAGA AGGAGGAGAA GAAGACGAAG GACACATCCT CTGTTTCGTT CACGACGAAA AGACATGGAA ATCGGAGTTA CAGATAGTTA ACGCCGTTAG CTTGGAGGTT GAAGCAACGG TTAAACTTCC GTCAAGGGTT CCGTACGGAT TTCACGGTAC ATTCATCGGA GCAGATGATT TGGCTAAGCA GGTCGTGTGA GTTCTTATGT GTATATACAC ACAAAATACG TATACGTGAT GAAGAAGCTT CTAGAAGAAA AGAGAGAGCG AGATTTACCA GTGGGATGCT CTGCATATAC GTCCCCGGAA TCTGCTCCTC TGTTTTTTTT TGTGCTCTGT TTCTTTGGTT GTTGTTTCTT TTGGGGTGCG GTTTGCTAGT TCCCTTTTTT TTTGGGGTCA ATCTAGAAAT CTGAAAGATT TTGAGGGACC AGTTTGTAGC TTTTGGGCTG TAGGGTAGCC TAGCCGTTTC GAGCTCAGCT GGTTTCTGTT ATTCTTTCAC TTATTGTTCA TCGTAATGAG AAGTATATAA ATATTAAACA AAAAGATATG TTTATATATG TGCATGTATT |
| Length | 2290 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 5732518.. 5734807 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G14440.1 |
| Description | nine-cis-epoxycarotenoid dioxygenase 3 |
| TAIR curator summary | Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane. |
| Alias | [ATNCED3][NCED3][SIS7][STO1][nine-cis-epoxycarotenoid dioxygenase 3][SUGAR INSENSITIVE 7][SALT TOLERANT 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg475300 | ARM repeat superfamily protein |
| 8.12404 |
Ahg950731 | C2H2-type zinc finger family protein |
| 8.83176 |
Ahg929308 | ethylene responsive element binding factor 4 |
| 9.94987 |
Ahg491272 | abscisic acid responsive elements-binding factor 3 |
| 14.9666 |
Ahg486731 | Protein phosphatase 2C family protein |
| 17.2337 |
Ahg487943 | sucrose phosphate synthase 2F |
| 22.8035 |
Ahg479472 | zinc-finger protein 2 |
| 25.3772 |
Ahg474972 | RING/U-box superfamily protein |
| 25.923 |
Ahg496938 | Protein of unknown function (DUF607) |
| 26.0768 |
Ahg474440 | ethylene response factor 8 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|