| Annotation |
|---|
| Description | jgi|Araly1|474549|fgenesh2_kg.1__4503__AT1G54170.1 |
| Sequence |
ACTCGTTTCC TCTTAGCATT GGTTGATTTC AGCTTTGTTG AGGTTAAAGC AACTATGAAG CCTGTTCTTC ACTCGGGCTC TTCATCCAAT GGATTTTCAC ACAGAAGAGT TGAAAAAGAG ACTGGGATGA ATAACGCACA GCCTTCTGCG GACACTACAG AAAACGGTTG GGAAGCTGGA AGTGTGGATA CCCTTTCTCA CAAGCTGTTA GTGTATTTCA CAACTTGTAA TATTGGACAT CAGGTAGAAG TTCATCTCAA AAATGGATCG GTTTACAGTG GCATATTTCA TGCTGCTGAT GTGGAGAAGG ATTTTGGAAT TATTTTGAAA ATGGCATGCT TGATGAGGGA TTCACGGGGA ACCAAATCCC GTTCGCCGCT TGTCAGCAAG CCACCTTCAA AGATACTCAT TATCCCTGCT GACGAACTTG TGCAAGTTAT AGCTAAGGAC CTTCCTGTAT CCAGCAATAA CGTCTCAGAT TCTGTTCAGT GCGAGAAGCC TTTAGAGCTG TTGACAGACT CTCTGATATC ACAGTTTTAT AATGTTGATT TGGAAAGAGA GCTGAAACCT TGGGTACCTG ATGAAGATGG TCCAGACTGT TCAGATCTGG AGAATGTGTT TGATGATCCT TGGAAGAGGG GCTGGAATCA GTTTGAGGTC AATAAGACAT TATTTGGAGT AACAAGCACT TTTGATGAGG AACTGTATAC CACAAAACTT GAGAGAGGTC CTGGAACGAG GGAGCTAGAA GAGCAAGCCT TGAGGATTGC GAGAGAGATT GTGGGTGAGA ATACTCGAGA TCTTCACGTA GCAGAGGAAA GAGGGCTCCA GCTTAGTGGA AAGTTTGATA TTGATGAGGA AACCAAATAC TCATCGGTCT GTACGGCTAA TAGATTTGAT GATACATGTT ATGAAGACGA AGACGAAGAA GAAGACATAT TGTTGGATTG CTGCAACAAT TTGACTTTTG GTGACTCTTC TGCTTCTGAT GGCAAGAAAC CTGCTTCAAC TGGCAAGGTC TACGAAGAAA CATGGGGTGA CAGCCTGCAT TTACGGAATA TCAACATTGT AGACCAGAGC TGGTCGAACT CAAATAAGCA TACTCACCAG CTTATGTCTG AACAGCCATC CAAAGATTTT CCTGTTGCAG GAAACAAAAT CAGGAATGAG AGCCAGCTTG GTGAGCAAAG AAAGAGCAAA TTTCTAGGGG CTTCCCTTTA TAGAAAGCCA TCTGAGGAAT CAGTGTCTGG TCTTGAAGAT GCACCACCAT CTGAGAAGCC AAGTTTCACT GCTGGAAGAC TCGGTCTACT CTCTGACAGA GCAAAATCTG AGAGCTCTTC TGGGTGGCCT GGAAGCTCCC TTTCTAGAAA TTCAGAAAAC TCTGCAGCTT CCTCAGCATC AAATCGTCCA ATACTATCAC CAAGCTCTTC AATTGGTTCT TTATCATCTG AAAAATCCAC ACTCAACCCA AATGCTAAGG AATTTAAACT GAACCCCAAC GCAAAGAGTT TCAAGCCATC TTCCCCATCA GCTAAAAGTC CTCAATCTCC AGTCCCAGAC GGATCATTCT ATTATCCTCC TGTTCCACCC ATGCCAGGAT TACGTATTCG ATTCGGAATG GGAGCAGCAT TCCCTGGACA ACAACACCCA ATGATGTATA ATAATACAAC ACAGCTTAGT CCTAATCAAA CATATTATTC TCCAAATAGT CCACAGTACC CACAACAGAT GATGGTTACT CAACAGAGAC CGGTCTTGTT CATGCCGCCA ACGCCATACC AACCGGAGAT GCCATACAAT GGAAGAGACT CTTATTAGCT TTTGGCCAAA ACCATGACTG GTGGTGGCTG GCACAAGGGA AGGTCTCGAA TATTCTGATG GAATTGGTTT CATTTAATTT ACTTTATTTT ATTTATTTCA AGCACCGAAT CTTTTCATTT TTATTTAATT ATTTTTAAAT TTGATGTGAT GGTGATTTAG TTTGTTTAGG TATTAGACTA GATTTTACAT TAGATTCTTG CTGATCTCAT TTCTTTATTC ACTTGTGTTT TAACGTTAAA TCTTT |
| Length | 2065 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 27523718.. 27528561 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G54170.1 |
| Description | CTC-interacting domain 3 |
| TAIR curator summary | ataxin-2-related, similar to SCA2 (GI:1770390) (Homo sapiens); similar to ataxin-2 (GI:3005020) (Mus musculus). Member of a family of PAM2 motif containing proteins. |
| Alias | [CID3][CTC-interacting domain 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg487627 | |
| 8.60233 |
Ahg495202 | splicing factor-related |
| 15.906 |
Ahg934985 | Heat shock protein DnaJ with tetratricopeptide repeat |
| 16.1555 |
Ahg481718 | Argonaute family protein |
| 16.7332 |
Ahg496441 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 19.799 |
Ahg482889 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 21.166 |
Ahg496743 | ENTH/VHS family protein |
| 23.1517 |
Ahg491315 | dynamin-related protein 3A |
| 23.622 |
Ahg477455 | COBRA-like protein 1 precursor |
| 23.9792 |
Ahg471128 | endoplasmic reticulum-type calcium-transporting ATPase 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|