Detail



ID : Ahg477455

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477455|fgenesh2_kg.3__156__AT3G02210.1
Sequence
GCTAATTGGT CATTTCTTGT TATTACGTCG AGCTTCTTCA AGCTTCATCC TTGTCTTGTC ACTTGTCAGA GACTTTAAGA TTAAAGATCA AAGAAGAAGA ACAGTTTCTC TCTCTTCTTT CTTCAGAAAA AATGGGTTTC TTGTGTTCTT CTTCTTCAAT CTTCTTCAAG TTCGGAATCT CTATAATCTT TCTAGTTTCT TTCTCTGGTT ATATTCCTTC AGAAGCATAT GATCCTTTGG ACCCGACTGG GAACATTACT ATCAAATGGG ATATCATAAC CTGGACTGGA GATGGCTATG TGGCGACTGT AACGATATAT AATTTCCAGC AATATCGACA CATTCAAGCT CCAGGTTGGA CTCTTGGATG GTCATGGGCA AAGAGAGAGG TTATATGGGG GATGAATGGA GGACAAACCA CAGAACAAGG AGATTGTTCA AAATTCAAAG GAAACATTCC TCATTGCTGT AAAAAGACAC CTTCTGTTGT TGATCTCTTA CCTGGAACTC CTTACAATCA GCAGATTGCT AATTGTTGCA GAGGAGGAGT GCTCAACTCG TGGGCTCAAG ATCCCGCAAC CGCTGTTTCC GCTTTCCAGC TTACTGTTGG ACAAGCTGGA ACCACAAATA AGACAGTTAG GGTACCTAAG AATTTCACTC TCAAAGCTCC TGGACCGGGA TATACTTGTA GTCCCGCGAA GATTGTAAAA CCGACTAGAT TCATCGGAAC TGACAAACGA AGAGTTACAC AAGCATTAAT GACTTGGAAT GTAACTTGCA CATACTCGCA GTTCTTAGCT CAGAAAACTC CTACTTGCTG TGTATCGCTT TCATCGTTTT ATAACAGCAC AATCGTTTCT TGTCCAACAT GCTCTTGTGG ATGCCAAAAC ACTTCTCAGC CAGGAAATTG TGTAGACCCA AAAGGTCCAC GGATAGCATC GGTCATTCCA AATCCAGGGA AGAACGCATA TATACCACCC CTGGTCCAAT GTACAAAGCA TATGTGTCCA GTTAGAATCC ACTGGCATGT GAAGGTCAAC TACAAACAGT ACTGGAGAGT TAAAGTCACC ATCACAAATT TCAACTACAA CATGAACTAT TCACAGTGGA ATCTCGTCGT GCAGCACCCG AATTTCGACA ATCTCACTCA GACTTTTAGC TTCAACTATA AACCCTTGAC ACCTTATGCT TCCATAAATG ATACTGGGAT TCTCTGGGGA ATAAAGTTCT ACAATGATCT GTTGATGCAA GCTGGACCAT TTGGTAATGT ACAATCTGAG CTACTTTTCC AAAAAGAAGC ATCAGCTTTC ACATTTGAGA AAGGTTGGGC ATTTCCAAGA AGAATTTATT TCAATGGAGA TAACTGTGTG ATGCCTCCTC CTGATTCTTA CCCTTGGCTG CCCAATACCG GCTCGCATAA ATCAATCGGT TCTCTGTTTG CAGCAATCGC CTTGTTACTG ACTCTGTTCC TACATGGAAA CTTGTAAGAA TCATTAAGTG TAGAATGTAG CTTATGATGC AGTTTTTTGA ACTGATAATG AGAGAATTGG TAGCTTAGTT CTTAGTGTTC CCTCGTCTGT CCTCTTCCTG TACAACGCTT TAATTTTAGT TTGTTAACTA AATCCCCTTG 
Length1630
Protein Sequence
Protein Residue
Map Locationscaffold_3: 463414.. 465768
Download Sequence
A.thaliana
AGI-codeAT3G02210.1
DescriptionCOBRA-like protein 1 precursor
TAIR curator summary
Alias[COBL1][COBRA-like protein 1 precursor]
Gene coexpression
MR
MR Locus Description
13.784 Ahg496670 beta-D-xylosidase 4
23.622 Ahg474549 CTC-interacting domain 3
37.9473 Ahg478489 Small nuclear ribonucleoprotein family protein
59.0169 Ahg938428 tonneau family protein
67.3053 Ahg494567 Zinc finger C-x8-C-x5-C-x3-H type family protein
69.8856 Ahg480092 Metallo-hydrolase/oxidoreductase superfamily protein
79.7496 Ahg485480 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632)
81.037 Ahg950506 SHV3-like 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression