Detail



ID : Ahg487627

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487627|fgenesh2_kg.6__761__AT5G07940.1
Sequence
CTCCTGCTTT CGTTAATTCT TGAATTCGAA AACCCTAACT TATTCTTAGC AATTGAGCAA GCAAAGCAAA GGAAGGCTTT TTTCTTCAGG TTCCCATTTG TTGTACGGCT AAACGTGACA CAAGTGTCAG GAGAATCTAT GAGTATTCAA AGCATGTCCG TTGGAGGAAG CTCATGAATT CTGGTGAAAG AGGTGTCAGA TAATTATAAA TAGTTTATCG GAGCTGAATC TATGCCTGGA AACGAATTTG GGGAGAAGAT CCACAATTTC TTTGGACAAG AAGGCCTCTC CCAAGACCAA AATCAGTCTC AGGTTGTTGA CGGAAGCTGG TCGAATTATA ATAATGGTCT ACTCGGTAAC CAGAGCCACA TAGACCCATC CCTTATTGCC AATCTGAAGA GTTATAACAC ACAACAATCT GTTGATCATG AGAGAGGTCA TCAATCTTCA AAATCACAGC ATGGTTTGAA TTATACTCAG CAGCCTATAA GGTCCGAGTT CTCGAGAAGG TTATTGCAAG AACACCAGCA ACTCTCAAAT GGTTACACGC ATGGCAACCT TGGGTTGCAG ACAATGCCGA ATGGGGCAAA TTTTTTGGGA GTTAATGTAG AATCTAGTAG GGATAGATTA TCAGCAAGGG GATTTACTCC AGAACTTCAT AAAATTCCTA TGAGCCTTGA GATGGGAGAA TCTCCAGTTA ATTATGATTT CTTTGGTGGT CAACAACAAT CAAATACACA GTTCCCTGGC ATGATCCAGC CTTTGCCAAG GCAGCAGATG ACATTCAATG ATATGCAACT ACTGAAGCAG CAAGTTATGG TTAAGCAAAT GCATGAATAT CAAATGCAAC AACAACTTCA AAGGCAACAG CTAGGGGCCA GGCAGGTCAA TTCTTTGAAT ATAAATGCAG TCAATGGAAG TCGCTCAAGT GATAACCAAT CACATATGAT CAATGGCATC CCTCTTCAAG ATGCGTCTAG TAACTGGTTG CAGCCAGATC TCATGACAGG AAATACAAAC TGGATGCATC GCGGCATCTC GCCAGTTGTT CAAGGTTCAT CCAGTGGGCT CATGATTACC CCTGAGCATG GGCAGTCAAA CTTAATGGCT CAACAATTTG GACCTTCCTT GTACGGTATG CCTGTTAGTG GGACAAATGC AGCTCAAAAT GCTTTTTCTT CCGTTCAGAT GAACAGGTTA GCTGCACCGC ATGGTTCTGC AAACAGGAGT TACTCTCTCA CTAATCAGCC AACGTCATTT CTCAATCAAG GTGGCGTACA GGATAGTCAA ATGCTCCCTA GATCCACATA CCAGGAAAAA GCGTTGTTCT CCCAGGCATC AGTGCCAGAT TCAAATAATA GGCCCACTTT TGAAAATTTC CAGCAAGATG ATTCCCGTGA GAGGAACATT TCAGCGCAGG AGAAATTTTG TCAGATGAAG GATTCTGGTC CATCAGAAAA AATATTTATG AAAGTGCCTG AAAATATAAA TGCATTGCAG AAGTCGTCAA CATTAGATCC AACTGAAGAA AAGATCTTGT TTGGTTCTGA TGACAATTTG TGGGATGCAT TTGGAAGCAG CACTGATATG AGCTTGCAAG GAAATCTTAT TTCCAGTAGT TCTGACCCAT TTGATGCATG CCCCTCTTTG CAAAGTGGGA GTTGGAGTGC CCTTATGCAA TCTGCTGTAG CAGAAACATC CAGCGAAGAT GCAGTTGTAC ATGGATGGGT TAACAACAAT ACTGTCCCAC ATGCGAATTC TCATACTGAT AGTAGATCCC ACAGTGATTC AAAGGCTTCA AATGCACTAA GTGAGAGATT CCACAGTGAT TCCACTCGGG CAGCTGTTCA GCATTTGCCT GACAAGGGAA ATAAATTTTC AGATCATGGC CTGTTGGAGA AGCCGATGGC TCAACTTAGT CAAATGGCTG GTAATATATT CCATTCTTCA AGTATTGATG AACAGAATAA TATGTGTTCT ATGCGACAGA ATGAGGGCAT TGAAGATAGA TTTGGTATTT GGAAGGCTGC TTCTAATCCA AATGTAGCTG CTCTGATTGA ACAGAAGAAT CATTTCACAC AAAATCCACA AAGGGCAAGC TATGGATTTG GCATTGCTAG TGCAGAAAAC GATTCTAGTG CTTCTAGGGA TGTCCAGGCC AGTAGCCAAC AACATTTGGA TAATAACTCT GTGGAGAAGG CTATCCCTCA ACTGAAATCT AGAGATGGCA GTCAGATTCT TGAGTCATAT GCAAGTAATA ATGCTGGAAC AAATGAAATG GTAAATACCC GTGATTTTTC TATGTTGCCT GGGGGAAAAG ACACACACTC TGGTCATGTC GGTAGTAGGC GCTCGATAAG TCGCAAATTT CAGTATCATC CGATGGGTAA TATCGATGTC ACTAATGAGT CTTGTCAAGA AAAAGTTTCT CATTTGCCAC CCACATTGGA GCAGGTCTCT GTAGGGAACC AAGGGTATTT TGGGCAGTCA AAGTTTCTTG GTCAGTCGGC TATGAACATG CCAATTGACA GGGGACATGT TTCACAAAAC GAATTGAATT GTACAAATGA GGCTTTTAAT GGCATGGGTT CAAAAAACTC ACCTAGTACA TCTGCTTCAG CTGACAGAAG TGTTGATAGG TGTAATCAAG TGAAGAGTGC TTCGTCAAGG CAGACTATGC TTGAGCTTCT TCACAAGGTG AACCAGTCGC CAGAGAATTC CTCGGAAACA AATATTTCTG GGATTCCTGA AGCAAATACC TCTGCAGACT ATGGTGGTCA ATTTCGGCAT AATCAGTCAT ATGCTTCTCA GGGGTTTAAT TTACAGTTGG CACCTCCATC TCAACTAGCT CCCTCACCTG ATAACGTGCA ATTTTCTCAG AATTCTTTGC AGCCATTAAA TTCATTTCAT ACTGGCCCTG AAAAAGGAGG AACAAGTCAG TCCAGGTTTG CTCCGTGGGC ATCTAATCAA TCTTTTCAGC AATCCACTCA TCAAGGACCA TTTCCTGGAA TTCTAGGAGG ATCAAACATG ACCTCTGGTT TCCCTTATTC CAGAGGGTAT CACCAAAATC AACAGATTCC TGTTGCTACC CGACAATCAG CTGCTAATAA TTCAGTCAAT TCATCTTCTG AGTTGTGTAC CCCTCAAGTG AAAGAAAGAA ATGAAAGTAG TGACTTTGAT CAACGTATGC TCTCTGCTTC TCAGCCTCTG GTTGCATCCA GCTCGACTCA GCAGAGTTCC TCTTTTGGTA TGATGTCTGA CTCACCAGCC GGTATTTCAG CACCTCAACA TCGGTTTTGG AACCAGTCAT CTAAGCCTCA GCCAGATATT TTAAGGCCGC ATCCATTGCC CAGCAACAAC ATGGCAGCTA GCTTCTCAAG GCAGGAGAAG ACAAACCAAT TATCCTCCCA AAATGGAGAC ATGTCATTAA GTGGGAGGGA CATGGTGAAT ATGCATGGGT TACAGAGTAA AGATATGGGT GCAAAACAAA CATCTAATGT TGCTTCAATG TTCTCCAAAA TGGTGCAGAG CAGTCATCAA TCCTTTGATC GCTCTCTTCC TCCAAGCAAC GTTCCAAAGG AAAGCTTACA TCACGATGAA CAAATGGTTG GAAGTGGGGA GGGCGATACA CCCAAGATGA CTGTTGATGA TAGTGCTTTT GATCCTCAAG AGGTAGCTCA CAAAGGGGAG CAACAATCAC CTTCAAGATC TGTTGGTTTA GTTAGAGGTG GATTGAATAA CAAGGAGTCA GCGAATCACA TGCCGCATTT AGGCCAACCT GTTTCTCAGA GTTTCTCCTC TAAGAATCAT GCAGCCTCGG CTGGAGCAGA TCATCAACAA ATCAGTCCTC AGATGGCTCC ATCCTGGTAT AGTCAATATG GGACTTTCAA GAATGGACTG GTGCAACCCA TGAATGATAC AGGGATATTT ACCCCTTTGA AAATAGGAGA ACAATCGTCT AATGTTGAGA GTTCGGTTGA TGGTACACAT ACTGTTCAAT CGTCGAAGCA GTGTAATATG CAGCAAATGT CAGGCTTCGC ACCAGGAGTT GAGACTCCCT CATCCGAGTC ATTGCTTCAT GGTGCTACTG ACAAGCTTTT GAAGGTTGAT AAACCAAAGA AGCGCAAAAC TGCCACATCA GAACTTCAAT CTTGGAATAA AGAAGTCACG CAGGATTCCC AGAGGCTTAA GACGCTCAGC GAGGCAGAGA TTAATTGGGC CAGAGCAACT AATCGATTTG CTGAAAAAGT GGAATTTGAG ACTTTACTGG AGGATGGCCC ACCAATCAGA TCAAAGAGAA GGCTTATACA TACATCACAA CTCATGCAGC AACTATTTAG CCCGCCTCCA GCAGGGGTAA TATCTTTAGC TGCGAGCTCA AACTATGAGT TTGTTGCATA TACTGCTGCA AGAGGTGCAC TAGGAGATGC ATGTAGCTCC AGTTGTATAG ACAGGAGTGA GCGCTTTTTG CCCCCAAACA ATTCAAACCC GTTGTCTGAG ACAACGAAAA CTGAAAAAAT CAGTGACCAG TACATCTCCA AAGCAGCTGA AGATTTCATT AGTAGAACAC AGAAACTAGA GACTGACTTT GCAGGGCTAG AAAATGGAAC TACAATTCCA GACTTGAGAG TTGAAGTCCA GGATCTAGAG AAGTTTGCAG TGATAAATCG TTTTGCGAAG TTCCACCCAC CATCTTCATC TATGGACCGG ACCGTGAATT CACTTAGGTT AAACCCACAA AGATATGTTA CCGTAGCTCC AATGCCTCAG AATATTCCAG ACAGGGTACA ATGTCTCTCT CTCTAACTAT TGATGGATCC ATATAATTCA CTTTTTGGCC AATCTTCCCC ATTCTTTGCT TTCATATATC TCTAGCCCCA AATCTTTCTA TTTTTGGGTG GGTATGAGTT AGTTGGTCGG AATCCTGAGA ACAGTAAAGG CCTCCGTTGT CAAAAAGCGG GAGATCCTCT ACTAAATATG TAGCATTACT GTATGCATCA TCACAAACAT TGTAAGTTAA ATCCATTTGT ATACTTTAGT AAAGAAATAT CGTTCAGTAC AGTAACCCCA ATAGGTAATC CAGTAAACAA AATATAGCAA TAAGTGGCAA TTTTGTTTAC ACAGCTACTA TTCTAA 
Length5136
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2965101.. 2971778
Download Sequence
A.thaliana
AGI-codeAT5G07940.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg474549 CTC-interacting domain 3
8.94427 Ahg473738
9.69536 Ahg944613 myosin, putative
18.5203 Ahg483451 RNA binding
21.8403 Ahg895977 RNA polymerase II transcription mediators
28.4605 Ahg935153 multiprotein bridging factor 1A
30 Ahg486560 SEC7-like guanine nucleotide exchange family protein
31.225 Ahg474178 Membrane trafficking VPS53 family protein
34.641 Ahg331135 Protein of unknown function (DUF616)
35.2562 Ahg913933
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression