Detail



ID : Ahg474557

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474557|fgenesh2_kg.1__4511__AT1G54140.1
Sequence
AGTCTTTCCC GATTCCTCGC CGCCGTTCAT CAATCTCTCC GTCGTGTTTC TGCCATTACC TCTCCTCCAA ACTATCTCTC TCGCGTTAGT TGTTTAGGGA TAAAAATGGC TGGAGAAGGT GAAGAAGATG TACCTAGACA TGCTAAGACT GTGAAATCTT TGCTTAAGTC GATGGGTGTA GAAGACTACG AGCCTCGTGT GATTCACCAG TTTCTGGAGT TATGGTACCG GTATGTGGTC GAAGTCTTGA CAGATGCTCA GGTTTACTCA GAGCATGCTA GCAAATCCAA CATTGACTGC GATGATGTCA AGCTCGCTAT TCAATCCAAA GTTAATTTCA GCTTCTCACA GCCACCTTCA AGAGAGGTTC TATTAGAGCT TGCTGCAAGC AGGAACAAGA TCCCTCTGCC AAAATCGATA GCAGGACCTG GTGTTCCACT CCCACCTGAA CAGGACACAT TGCTGAGCCC AAATTACCAG CTCGTGATAC CCAAGAAGTC AGTGTCCACA GAACCTGAAG AAACCGAAGA CGATGAAGAA ATGACAGATC CTGGACAGTC CTCTCAAGAA CAACAACAGC AACAACAACA AGCATCAGAC CTTCCAAGCC AAACTCCTCA AAGGGTCTCT TTTCCACTCT CTAGACGACC CAAATAAGTA TTATGTATCA ACAAGTAG 
Length678
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27619794.. 27620931
Download Sequence
A.thaliana
AGI-codeAT1G54140.1
DescriptionTATA binding protein associated factor 21kDa subunit
TAIR curator summaryputative TATA binding protein associated factor 21kDa
Alias[TAF9][TAFII21][TBP-ASSOCIATED FACTOR 9][TATA binding protein associated factor 21kDa subunit]
Gene coexpression
MR
MR Locus Description
49.0816 Ahg950713
52.7257 Ahg943849 SAUR-like auxin-responsive protein family
56.6569 Ahg887495 phloem protein 2-A6
58.8388 Ahg938840 nucleic acid binding;methyltransferases
68.4105 Ahg921548 sphingoid base hydroxylase 1
69.1665 Ahg950619 Protein of unknown function (DUF295)
75.7166 Ahg902520
79.278 Ahg488242 non-intrinsic ABC protein 14
80.1998 Ahg349310 Putative endonuclease or glycosyl hydrolase
91 Ahg950365 CCCH-type zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression