| Annotation |
|---|
| Description | jgi|Araly1|495390|fgenesh2_kg.8__1206__AT5G53180.1 |
| Sequence |
CCAAATCTTC GTCTCTTCTT TATCTTCCCC AGCGCGAGCG AAACCCTAAC TTCTCTGCAG ATTTTGCACA ATCTCAGCTC CAAGATTCGT TTGAGAAATG TCATCTGTTT CAAGCCAGCC ACAGTTTCGT TACACGCAAC CTCCTTCAAA GGTTCTTCAT TTGAGAAACT TGCCATGGGA ATGCACTGAA GAAGAGTTAA TTGAACTCGG CAAGCCTTTT GGTACTGTTG TTAATACAAA GTGCAATGTT GGAGCTAATC GAAATCAAGC TTTCATTGAG TTTGAAGATT TAAACCAAGC TATACAAATG ATTTCTTACT ATGCTTCTTC GTCGGAGCCG GCTCAAGTTC GAGGTAAAAC TGTCTACCTC CAGTACTCTA ACAGGCAAGA GATAGTGAAT AACAAGACGA CAGCGGATGT TGTGGGGAAT GTTCTTCTGG TGACTGTCGA AGGCGAGGAT GCTCGTATGG TCAGCATTGA TGTCTTGCAT CTGGTATTCT CAGCATTTGG GTTTGTCCAC AAGATTACTA CTTTCGAGAA GACAGCCGGA TACCAGGCAC TGGTTCAATT TTCTGATGAG GAAACTGCAA CCGCTGCAAA AAATGCCCTT GATGGAAGAA GCATCCCTAG GTATCTACTC GCTGAGCAAG TGGGACAATG CTCACTTAAA ATCACATATT CAGCTCATAC AGATCTGACT GTCAAATTTC AGAGTCATCG GAGCAGGGAC TATACTAATC CTTACCTTCC AATTGCTCCA TCAGCCATTG ACAGTACTGG TCAGGTGGCT GTGGGTGTAG ACGGGAAGAA GATGGAGCCT GAAAGTAATG TTCTTCTCGC ATCCATTGAA AACATGCAGT ATGCAGTAAC CTTGGATGTT CTACACATGG TTTTTGCGGC TTTTGGGGAT GTTCAAAAAA TTGCAATGTT TGACAAGAAT GGTGGGCTAC AGGCACTGAT CCAATACAAA GATGTTCAAA CGGCTGTTGT GGCGAAGGAA GCATTGGAAG GACATTGTAT CTATGATGGT GGTTTTTGTA AGCTCCACAT TACTTATTCA CGCCACACTG ACCTCAGCAT AAAGGTGAAC AACGATAGAA GCAGAGACTA CACAATGCCC AACCCACCGG TTCCAATACC TCAACAACCC GGTCAGAATC CATACACCGG CAATCCACAG CAATACCACG CAGCAGGTGG GAGCCACCAG CAGCAGCCAC AAGGTGGATG GGTCCAACCA GGAGGGCAAG GCTCAATGGG AATGGGTGGT GGTGGTCACA ATCCTTACAT GGCACCACCA TCTTCAAGCT CAATGCATTA TGGTCCGGGT GGTCATATGC CTCCACAGCA TTATGGTGGT CCTGGTCCAA TGCATTAGAG AGAGAAAGAA AGAAAGTCCC TAAAAGTCGA AGACAAAAAG ATGTTTAATC TCTCTCTTTA TCTCTCGTAG CTCTGTTTTT TTTTTTTGGA ACACTAGTAC GTGTGTCCAA ATGATGATTT TTAACTATTA AACCATTCGA GAAATGTATT AGAATCTATG TCTCTCTCTC G |
| Length | 1551 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 14614560.. 14618034 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G53180.1 |
| Description | polypyrimidine tract-binding protein 2 |
| TAIR curator summary | Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination. |
| Alias | [ATPTB2][PTB2][POLYPYRIMIDINE TRACT-BINDING PROTEIN 2][polypyrimidine tract-binding protein 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.9282 |
Ahg480649 | high mobility group B4 |
| 12.1244 |
Ahg474701 | TBP-ASSOCIATED FACTOR 6B |
| 14.8324 |
Ahg933395 | splicing factor PWI domain-containing protein |
| 15 |
Ahg904413 | phosphoesterase |
| 16.4924 |
Ahg471855 | Per1-like family protein |
| 22.1811 |
Ahg470771 | Transcription factor IIA, alpha/beta subunit |
| 22.3159 |
Ahg491582 | serine/arginine-rich 22 |
| 27.1293 |
Ahg495092 | radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein |
| 28.4605 |
Ahg472800 | ARM repeat superfamily protein |
| 30.5941 |
Ahg940565 | Tudor/PWWP/MBT superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|