Detail



ID : Ahg474807

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474807|fgenesh2_kg.1__4761__AT1G56440.1
Sequence
TCTCTCAGTA TGTCTAGGTC ACCGAACAAA CACGGCCGCG ATCAAACTCA GGGATTTTTG AATGACTTGC AGGATTGGGA ACTTTCATTG AAGGATAAGG ACAAGAAAAT CAAGCAGCAA CGCGATAATT CATCGAATCC GAGTAGTGAG AATTTCAGAC CAAGTGGTTC AGGGCAATAT GATTTTGTAA AAAATTATCA TTCCGTTAGA GATTTGTCGA GTAGTTTGAT CGGAGAAAGT CTCTTGGATT CTAATTCAGA GAAGGAGCAG GGAAATGAAT TTTTCAAGCA GAAGAAGTTT AATGAGGCGA TTGATTGTTA CTCTCGAAGC ATTGCTTTAT CACCAAATGC TATTGCTTAT GCAAATCGAG CAATGGCTTA TCTTAAGATC AAAAGATATC GAGAAGCGGA GGTAGACTGC ACAGAAGCCT TAAATCTGGA TGATCGTTAC ATAAAAGCAT ACTCACGCCG AGCAACAGCC AGAAAAGAAC TTGACATGAT TAAAGAAGCC AAGGAAGATG CTGAGTTTGC TTTAAGATTG GAGCCTGAGA GCCAGGAACT TAAGAAGCAA TATGCCGACA TCAAATCTTT GCTTGAGAAA GAAATCATTG AGAAAGCCAC TGGAGCTATG CAAAGCACTG CACAAGAATT ACTCAAAACA TCAGGTTTAG ATAAGAAAAT ACAAAAGCCA AATACAGAGA CTTTGAAGCC GGTGACCCTA GGGGCCAAAA CGAACAGGGA TATGGGTCAG CCTGTTCCAG GTAGCAAGGA AAGTTCGGGA AAGAAGCTCA TTGAAAATAT ACAACCTGAG GGGAAAAGCA AAGAAGGTTC CAAGAAAATT CCAGCTATCA CGGAAAATCT AGACAGCAAG AAAGTGACGC CTAGAGTCCA AAGTTATGAA AAGGAGGTTA AGTCTTCTGA CAGAAATGGT ACTCAGCCTT CTAGACAGGG AAACCAGGTT TCTAAAAAGC TGGAACTAAA GCCATCAGTA CAAGAGCTTG CTGCCCATGC AGCATCACTT GCGATGTCTG AAGCTTCTAA AAACATTAAA GCCCCAAAAT CTGCTTACGA ATTTGAGAAC TCTTGGCGGA GTTTTTCTGG CGACCTTGCT CTACAAACCC AATTGTTGAA GGTCATATCT CCGAGCTCTT TACCTCAGAT TTTCAAGAAC GCCATGACTT CTCCGGTGCT GGTTGACATA ATAAAATGTG TAGCCTCATT TTTCACTGAA GACATGGATT TGGCTGTTAA ATACATTGAG AACCTAACAA AGGTTCCTAG ATTCAACATG CTCGTCATGT GCCTTACCTC AACCGAGAAA AACGAGCTTC TGAAGCTATG GGAAGATGTT TTCTGCAATA AAGCAACCCC AATGGAGTAT GCAGAGGTCT TAGACAAACT GAGGTCAAGA TACTGCCTCA AACAGTAACT TAGGAGATGG CTCTTTTTAG CAGTGTGCAT GGTGAAGATT TTGCACACCC AGTAGGCCAG TAAGCATTTC TCAATGATCA TGAAACAGTT TTTGTTCATA TATTTACCGT TTTGTTTTGG TTTACCTGAA AACTGTCAAC TAATATAACT AAGGAAAAGC TATCGTCAGT TTTCATTTCA TC 
Length1612
Protein Sequence
Protein Residue
Map Locationscaffold_1: 30683154.. 30686108
Download Sequence
A.thaliana
AGI-codeAT1G56440.2
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[TPR5][tetratricopeptide repeat 5]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg474686 nuclear factor Y, subunit C2
11.3137 Ahg476401 P-loop containing nucleoside triphosphate hydrolases superfamily protein
14.1421 Ahg493706 ZPR1 zinc-finger domain protein
15.5885 Ahg480886 DNAJ heat shock family protein
17.7482 Ahg486839 Bax inhibitor-1 family protein
20.7846 Ahg321802 Ubiquitin-associated (UBA) protein
22.3607 Ahg483772 BCL-2-associated athanogene 6
29.2916 Ahg950332 profilin 3
31.305 Ahg922056 SGS domain-containing protein
33.1361 Ahg332329 ABC transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression