Detail



ID : Ahg474818

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474818|fgenesh2_kg.1__4772__AT1G56590.1
Sequence
AGAGATGCTT CAATGTATAT TCCTCATCTC CGATTCTGGA GAGGTGATGC TAGAGAAGCA GCTTACGGGT CATCGCGTTG ATCGATCCAT TTGTGCTTGG TTCTGGGATC AATCTATTTC TCAAGGCGAT TCCTTTAAGT TACTTCCAGT GATTGCTTCA CCAACACATT ATCTATTTCA AATCGTTCGC GATGGCATTA CGTTATTAGC TTGTAGTCAA GTTGAAATGC CACCGTTGAT GGCAATCGAG TTTCTTTGCA GAGTTGCTGA TGTTTTGTCT GATTACCTTG GTGGGTTAAA TGAAGATCTG GTTAAGGATA ATTTCATCAT TGTCTATGAG CTTTTGGATG AGATGATCGA TAATGGTTTC CCTCTCACAA CAGAACCGAG CATCCTGAGG GAAATGATAG CTCCACCAAA CCTAGTCAGC AAAATGTTGA GTGTTGTAAC GGGAAATGCA TCCAATGTTA GTGACACACT CCCGAGTGGG GCTGGCTCTT GTGTTCCATG GCGACCGACA GATCCAAAGT ACTCTAGCAA CGAAGTTTAT GTCGACCTCG TTGAAGAAAT GGATGCAATT GTAAACAGGG ATGGAGAATT GGTAAAGTGC GAGATTTATG GCGAAGTCCA AATGAATTCC CAGCTCAGTG GTTTTCCAGA TTTGACATTG TCGTTTGCGA ATCCAGCCAT CCTCGAAGAC ATAAGGTTTC ACCCGTGTGT CCGCTTCAGA CCGTGGGAAT CTCATCAAGT TCTCTCATTT GTCCCTCCAG ATGGAGAGTT CAAGCTCATG AGTTACAGGG TGAAGAAGCT GAAGAACACA CCTGTATATG TAAAGCCTCA AATAACATCA GATTCGGGTA CATGTCGAAT TAGCGTGCTA GTGGGGATCA GAAACGACCC GGGAAAGACG ATTGAGTCCA TAACCTTGAG TTTCCAGCTT CCTCATTGTG TTTCATCTGC AGATCTCTCA TCAAATCATG GAACTGTAAC CATCCTCTCT AACAAGACAT GTACATGGAC AATCGGGCGA ATCCCAAAAG ACAAGACTCC TTGTTTGTCG GGAACACTAA CGCTGGAAAC GGGTTTAGAA CGGCTTCATG TGTTTCCGAC ATTCAAACTC GGGTTCAAAA TAATGGGCAT TGCTCTTTCT GGCCTTAGAA TCGAAAAACT TGATCTTCAA ACTATCCCTC CTCGTCTGTA CAAAGGGTTT CGTGCTCAGA CACGCGCCGG TGAGTTTGAT GTCAGATTGT AGCTTTCTGG TACGGTCATG CCGGTCAAAA GTCTTGACTT TGGGCACCTG TGAATTGTTT GTGCCAAATG GTTTTATACA TCCAATGGTT TTT 
Length1343
Protein Sequence
Protein Residue
Map Locationscaffold_1: 30918119.. 30920766
Download Sequence
A.thaliana
AGI-codeAT1G56590.1
DescriptionClathrin adaptor complexes medium subunit family protein
TAIR curator summaryInvolved in vesicle trafficking between the trans -Golgi network and vacuoles.
Alias[AP3M][ZIP4][adaptor protein-3 mu-adaptin][ZIG SUPPRESSOR 4]
Gene coexpression
MR
MR Locus Description
20.0499 Ahg345735 Prenyltransferase family protein
28.1069 Ahg950590 smr (Small MutS Related) domain-containing protein
36.4417 Ahg485242 RNI-like superfamily protein
43.9318 Ahg470649 acyl-CoA oxidase 3
47.4342 Ahg486008 proline transporter 2
53.2729 Ahg929508 Tetratricopeptide repeat (TPR)-like superfamily protein
59.95 Ahg318458 calmodulin binding;transcription regulators
60.2993 Ahg470845 Surfeit locus protein 5 subunit 22 of Mediator complex
61.0901 Ahg924606 Protein kinase protein with tetratricopeptide repeat domain
67.838 Ahg489030 calmodulin 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression