Detail



ID : Ahg929508

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929508|scaffold_301965.1
Sequence
CTTTGCTTTT GAGGAGAAAT CATGAATTCG AACTTCGGGA AGAGATCATC GGGACCGATC AATAGCTTCG ATTTCGATCT GGGACTCGGA TCGAGCCAAG GTAGACCTCT TAATGGTCAG AAGAGCCAAA CATCTTCCTA TTCAAGCTCG AATTCGCAGC CGAGACCTGC GTGGCAGCCT GGTAAGCCGT CGTGGACGCA TCAACCTGCA CCGAAGCAGA GTACGATTCG ATCTGAGATC GGAAGTGGAC CGACTTCAAT GGTGGGTGAT ATTCATGGTA AGACTTGGGG TTCAGCTTCG GGATCGGATT CGGGGATTGG GATTGTGAAT AAGGATCCTA GCTTGTTTGG AGATCTGGTG GGTTCTGCGA TAGGTCAAGG TAAATCTAGT AGAAACGTGC CGTTGAAGAA TGCACCGCCT GTTTCGGCTT CAGGTTCTAG TAAGAGTCCT TATTCTATGG GGAATTTTGC TGATTCGTTG CCCAAATCTG GTAATTCTAT GAAAACTGGT GGTGGTATGG GTTATAGCAG TAATCCGAGT GGTTTTTCTG GTGGTTACAC GATCTCCGGT GGTATGAATT CTGGTGTTAA TGCTAATAGT AGTCCAAATC TTGGAGGTCC TTCAATGAAA AATATGTCTG GGGGTAATCT AAGTGGGTCT GGTCTTCCTT CGAACAGCGA TCCTTTTGGT TCTTTGGTTG GTTTCGGATC AAAATCATCA GGAAGCATCA ATTCTGGAAT CAAAACAGGA AAGGTTAACA ACAATGCACA GAGTGCTGCT TTTGGGAATT TTCAAGGAGA GTCAAACCTT AACGGTAGCG GTTTTGCTTC GAAATCAAAC ACATTCTCAT CAGGCGGTAG CTTCAATGCT TCAAACGTTG GTTTTGGTGT GCTACCAAGT GGTCCACAAT CTTCAAGTGC AAACGATGAT CCATTAGGAA TGTTCTCTAG TTCCAAACCC ACAGCTGCAG CGGCTACACC ACAGACTGAA GATTGGGGAT TTGAAAGTTT TGACGGTGGG GCTGGTTCCA CCACCGAGCT TGATGGTTTG CCACCACCTC CACCGGGTGT ATCAGCTACA TCAGCTAAGA GCAAGGGCAT TGATAACCAG AGACAAGGTC AGTATGCTGA TGCCATAAAG TGGCTCTCTT GGGCTGTGAT TCTTATGGAT AGAGCTGGCG ATGAAGCTGG ATCAGCCGAG GTTCTTTCAA CAAGGGCTTC GTGTTACAAA GAAGTTGGAG AGTATAAGAA GGCTGTAGCC GACTGCACAA AGGTACTTGA TCACGACAAG AAGAATGTGA CCATTCTGGT TCAACGAGCA CTTTTATACG AGAGCATGGA GAAATACAAA CTCGGAGCTG AAGACCTAAG GATGGTTCTA AAGATCGATC CCGGGAATAG AATTGCTAGA AGCACCGTTC ACCGCCTAAC CAAAATGGCT GGTTGATCCT TCATATATAC CGATACT 
Length1467
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6712929.. 6714878
Download Sequence
A.thaliana
AGI-codeAT3G16760.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.60555 Ahg485497 Phosphoinositide phosphatase family protein
7.74597 Ahg927762 Class I glutamine amidotransferase-like superfamily protein
8.48528 Ahg934997 transcription factor IIB
10.583 Ahg489715 phosphotyrosyl phosphatase activator (PTPA) family protein
12.8062 Ahg490214 glucan synthase-like 5
14.8324 Ahg493917 succinate dehydrogenase 2-2
21.2132 Ahg919332 Rho termination factor
21.4476 Ahg333107 Protein of unknown function (DUF1012)
23.3238 Ahg358235 RNA binding (RRM/RBD/RNP motifs) family protein
23.8118 Ahg933137 Protein of unknown function (DUF1279)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression