| Annotation |
|---|
| Description | jgi|Araly1|345735|fgenesh1_pg.C_scaffold_4002077 |
| Sequence |
ATGTACGAGT TGCTTCCGTA CCATTACCAA TCTCAGGAGA TCAATCGTCT CACTCTTGCT CACTTTATAA TCTCGGGTCT TCACTTTCTC GGCGCAATAG ATCGTGTTGA CAAAGATGTT GTTGCAAAGT GGGTTTTGTC CTTCCAGGCC CTTCCTAGTA ACAGAGTTTC ACTGAAAGAT GGAGAATTCT ATGGTTTCTT TGGTTCAAGG AGTTCTCAGT TTCCCATTGA TGAGAATGGG GATTTAATTC ACAACGGTAG TCACTTGGCA AGCACTTACT GTGCCTTGGC CATTCTTAAG GTCATTGGAC ATGATCTCTC GATCATCGAC TCTGAGTCGG TACTGTTTTC CATGAAAAAC CTTCAACAGG ATGATGGAAG CTTCATGCCT ATCCATATTG GCGGAGAAAC GGATCTTCGA TTTGTATATT GTGCAGCTGC AATCTGTTAC ATGCTGGATA ATTGGAGTGG AATGGACAAG GAGAGCGCTA AGAACTACAT ATTAAACTGT CAGTCATATG ATGGTGGCTT TGGGTTGATC CCTGGTTCTG AGTCTCATGG TGGTGCCACT TACTGTGCTA TTGCATCCCT TCGGTTGATG GGATACATTG GAGTTGATCT GCTGTCAAAT GATTCATCCA GTTCAATAAT AGACCCTTCA TTACTTCTCA ACTGGTGCCT ACAGAGACAA GGCAATGATG GTGGGTTTCA AGGTAGGACT AATAAGCCAA GTGACACATG CTATGCATTT TGGATTGGAG CTGTCCTTAA ACTCATAGGA GGCGATGCAT TGATTGACAA AATTGCTCTG CGCAAATTTT TACTGAGTTG TCAGTCCAAG TATGGTGGAT TCAGTAAATT CTCCGGACAA TTACCGGATC TGTATCATTC ATACTACGGT TACACGGCTT TCAGCCTCTT GGAGGAACCG AGCTTGAGTC CTCTATGTCC TGAGCTAGGG TTACCTCTTC TTGCAGCCTC GGGGATTTGA |
| Length | 990 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 18217578.. 18219779 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G39550.1 |
| Description | Prenyltransferase family protein |
| TAIR curator summary | encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways. |
| Alias | [ATGGT-IB][GGB][PGGT-I][GERANYLGERANYLTRANSFERASE-I BETA SUBUNIT] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg492235 | glycerol-3-phosphatase 1 |
| 7.34847 |
Ahg356279 | GATA transcription factor 27 |
| 7.54983 |
Ahg352501 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| 16.4924 |
Ahg488893 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 17.2047 |
Ahg484483 | ENTH/VHS family protein |
| 17.4642 |
Ahg473553 | Smg-4/UPF3 family protein |
| 18.0831 |
Ahg494615 | myosin 2 |
| 18.1659 |
Ahg494356 | ornithine-delta-aminotransferase |
| 20.0499 |
Ahg474818 | Clathrin adaptor complexes medium subunit family protein |
| 20.347 |
Ahg897087 | HOPM interactor 7 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|