Detail



ID : Ahg474854

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474854|fgenesh2_kg.1__4808__AT1G57680.1
Sequence
GGTTGTCACA GCTGGAAACA GCCTGTCACC AACGGAGAGT CTCTCTCTTC CCTTCTTCTC TCTCTCTAAT CTTTTTTTTT TCTTCCTTCT TCTCTATCTC TCCTTTTCCT TCTTCTTCCT CCTCCTCCTC TCTCTGTTTA TTTGCTTCTT CTCTTTCTCC GATTCTTATC AATCTCCTCC GCTCAGATCT TCCCCGTTTC AACTCTTTGG ATCCAGATTC TCCTCCTTTT TATGTAGGTA ACACGCATAT CAAGTGTTAA AGAGTCAAGA TCACAAAAAG TTCTATCGGG TGATCTGGGC TGCTTTGTTT TGTAATCTAA TTGCAGAAAC TTGCTCTGAC TTGGTGGAGT TTGATAGCTT GCGTAAAAGG TTCAATCTTT CTCCGTTTTT TCATCGATGA GTAGTTACTA ATCTGGAAAT TTGTTGGGAG AGAAAAGGAA GATTTTACTG CTATTGCTAG AGAACTTTTC TGCATCCATG CTGGTAGAGA GCATGCGTGG ATACTGTGTT TTGGGTGATG CCCCTGACAA AATTAGTTCC CGATGCATTC GGCGTTGTGA CGATATGTCT AGTCGCTCTG CTAGTTCTTT TGGGTCTCCT TTGCATCGCT TACTCGTTCT ATTTCCAGTC TCACGTTCGT AAGCAAGGGT ATATTCAACT TGGTTACTTC AGTGGTCCTT GGATTATCCG AATTACATTC ATTCTGTTTG CTATCTGGTG GGCTGTTGGT GAGATTTTTC GATTGAGTTT GTTGAGGCGT CACAGAAGGT TATTGAGTGG GTTGGATCTG AGATGGCAAG AAAACGTTTG CAAGTGGTAC ATCGTTTCCA ATCTAGGATT TGCGGAGCCT TGCCTCTTTC TGACTCTCAT GTTTCTTCTG CGTGCTCCCT TGAAGATGGA ATCAGGGGCT TTGAGCGGAA AATGGAACAG GAACACAGCA GGTTATATTA TTCTTTATTG TCTCCCGATG CTTGCTCTTC AACTTGCGGT TGTGTTATCC GAGTCACGCC TAAATGGTGG TAGTGGCTCT TATGTAAAGC TGCCACACGA CTTCACAAGA ACGTATTCCC GAGTTAATAT TGATCACGAT GAGGTCGCCT TATGCACATA TCCTCTACTG AGTACAATCC TTCTTGGTGT GTTTGCAGCC ATCCTAACAG CTTACTTGTT CTGGCTTGGA AGGCAGATAC TGAAACTTGT CATTAACAAG CGTTTACAGA AGAGAGTATA CACTTTGATA TTCTCCGTCT CGAGTTTCCT TCCATTAAGG ATTGTTATGC TCTGTTTGTC GGTTCTCACA GCAGCAGACA AGATTATATT CGAAGCCCTT TCTTTCTTGG CCTTCCTCTC CCTCTTCTGC TTTTGCGTGG TATCCATCTG CTTGCTTGTC TACTTCCCGG TTTCAGATTC CATGGCCCTG AGAGGTCTAA GGGACTCAGA CGAAGAGGAT ACGGCTGTGA CCGAAGAACG CAGTGGTGCT CTGTTACTTG CACCAAACAC TTCACTAACT GATGAGGGCT TGAGCTTAAG AGGTCGGAGA GACTCGGGAT CGTCTACACA GGAGAGGTAT GTGGAACTCA GCCTATTTCT GGAAGCTGAG AACTAAAATC GTCAAAGGCT GTTTCTATTT GGCTTTTGGC AATGTACAGA TTCCTGGTGA CACAAGCAGA GAGAGAGAGA GGGCTACTAA AGAGTTTAAG TAAGAGAATA TGTTTGCGCA AAAAAAGGCA TAATTTCAGT TTTGTGGCAA AGACACTTTG ACTGTAAAGG AGGGTTTAAG GGGGGTTTAC TCTTGTGAGG GTTTGTTGTT TGAAATGTTT TCTGCTTGAT GGATCATATT TTTGTACCTT TATTATGTGA TCAATTTTGA TTTAG 
Length1875
Protein Sequence
Protein Residue
Map Locationscaffold_1: 31340027.. 31342285
Download Sequence
A.thaliana
AGI-codeAT1G57680.1
Description
TAIR curator summary
Alias[Cand1][candidate G-protein Coupled Receptor 1]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg492011 oligopeptide transporter 1
8.48528 Ahg923698 indole-3-acetic acid inducible 18
14.4914 Ahg490321 F-box family protein
19.8997 Ahg497051 Leucine-rich repeat (LRR) family protein
21.8174 Ahg474507 STRUBBELIG-receptor family 6
29.8998 Ahg951624 armadillo repeat only 2
30 Ahg485891 Plant-specific GATA-type zinc finger transcription factor family protein
32.0156 Ahg478618 nudix hydrolase homolog 16
35.2846 Ahg931800 3-ketoacyl-CoA synthase 9
40.6202 Ahg928358 pigment defective 320
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression