Detail



ID : Ahg931800

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931800|scaffold_304257.1
Sequence
TTCCATTTTT CTCGGAAGCC ATGGAAGCTG CTAATGAGCC TGTTAATGGC GGATCCGTAC AGATCCGAAC AGACAACGAA AGACGAAAGC TTCCTAATTT CTTACAAAGC GTCAACATGA AATACGTCAA GCTAGGTTAT CATTATCTCA TTACTCATCT CTTCAAGCTC TGTTTGGTTC CATTAATGGC GGTTTTAGTC ACAGAGATCT CTCGATTAAC CACTGACGAT CTTTACCAGA TTTGGCTTCA TCTTCAATAC AATCTCGTTG CTTTCATCTT TCTCTCTGCT TTAGCCATTT TTGGCTCCAC CGTTTATATC ATGAGTCGTC CCAGATCCGT TTATCTCGTT GATTACTCTT GTTATCTTCC TCCAGAGAGT CTTCAGGTTA AGTATCAGAA GTTTATGGAT CATTCTAAGT TAATTGAAGA TTTCAATGAG TCTTCTTTAG AGTTTCAGAG GAAGATTCTT GAACGTTCTG GTTTAGGTGA AGAGACTTAT CTCCCTGAAG CTTTACATTG TATCCCTCCG CGTCCGACGA TGATGGCGGC GCGGGAGGAA GCTGAGCAGG TAATGTTCGG TGCTCTCGAT AAGCTTTTCG AGAACACCGA GATTAACCCG AGGGATATTG GTGTGTTGGT TGTGAATTGT AGCTTGTTTA ATCCTACACC TTCGTTATCT GCTATGATTG TTAACAAGTA TAAGCTTAGA GGGAATGTTA AGAGTTTTAA TCTTGGTGGA ATGGGGTGTA GTGCGGGTGT TATCGCTATC GATTTAGCGA AAGATATGTT GCAAGTTCAT AGGAATACTT ATGCTGTTGT GGTTAGTACT GAGAATATTA CTCAGAATTG GTATTTTGGG AATAAGAAGG CAATGTTGAT TCCGAATTGT TTGTTTCGGG TTGGTGGTTC GGCGATTTTG TTGTCGAATA AGGGTAAGGA TCGTAGACGG TCTAAGTATA AGTTGGTTCA TACGGTTAGG ACTCATAAAG GAGCTGTTGA GAAGGCTTTC AATTGTGTTT ACCAAGAACA GGATGATAAT GGGAAGACCG GGGTTTCTTT GTCGAAAGAT CTTATGGCTA TAGCTGGGGA AGCTCTTAAG GCGAATATCA CTACTTTGGG TCCTTTGGTT CTTCCTATAA GCGAGCAGAT TCTGTTTTTC ATGACTTTGG TTACGAAGAA ATTGTTTAAC GCTAAGCTGA AGCCGTATAT CCCGGATTTC AAGCTTGCGT TCGATCATTT CTGTATCCAT GCTGGTGGTA GAGCTGTGAT TGATGAGCTA GAGAAGAATC TGCAGCTTTC TCAGACACAC GTCGAGGCAT CGAGAATGAC ACTGCACAGA TTTGGAAACA CATCATCGAG CTCGATTTGG TATGAACTGG CTTACATAGA GGCCAAAGGT AGAATGAAGA AAGGAAACCG GGTTTGGCAG ATTGCTTTTG GAAGTGGGTT TAAGTGTAAC AGCGCGGTTT GGGTGGCTCT GCACAATGTT AAGCCTTCGG TTAGTAGTCC ATGGGAACAC TGTATCGACC GATATCCGGT TAAGCTCGAC TTCTGATTTA ATCAAAAACC ATTTGTTT 
Length1578
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21848305.. 21849882
Download Sequence
A.thaliana
AGI-codeAT2G16280.1
Description3-ketoacyl-CoA synthase 9
TAIR curator summaryEncodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Alias[KCS9][3-ketoacyl-CoA synthase 9]
Gene coexpression
MR
MR Locus Description
18.0831 Ahg899620 arabinogalactan protein 17
18.7617 Ahg476826 Nucleotide-sugar transporter family protein
25.9615 Ahg890648 proline-rich family protein
27.1662 Ahg923799 Rubredoxin-like superfamily protein
27.3313 Ahg483921 Tetratricopeptide repeat (TPR)-like superfamily protein
27.9285 Ahg474507 STRUBBELIG-receptor family 6
32.1714 Ahg472235 RHO-related protein from plants 2
35.2846 Ahg474854
36.7423 Ahg470748 Calcium-dependent lipid-binding (CaLB domain) family protein
37.6829 Ahg470362 FASCICLIN-like arabinoogalactan 9
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression