Detail



ID : Ahg474984

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474984|fgenesh2_kg.2__114__AT1G63670.2
Sequence
TAAAAATCTT TTCTTTTTTA ATTACATGAG TAGATGAAGA GACAAGGGTC CCTATAATTT TCTCTTTAGA TCTTCAAAAC CCAAACCTCA ATCATGTTGG TCCCTCCATC ATCACAAAGC TGAGTGCTTG ATTGGCTCCA CAGACAGTCT CTGTAAAGAA AAGTTTGCAT TTTTTTTCTG ACCCAGTTCA ACCAAAAAGC TCTGGTCTTT GAGAAACGAT TTTACTAAAT TGGAGACGAG AGTTTTGAAT GATTGGTGAA TTTGTTGTTG ATCATCAATG GAGAAGAAGC GATCACCGAG AAGTAGCAAG AGTCCTGGAC CTGCAATTTT CCCTAAAAGC CCTCTTGTCT ACGAGAATTA TAAGTCTGGT TGTGGTTGGA AACTGATAAA GTTCTTCGAT TTCGGTCATG TCAAATCTGG TAATAAGAGA CTTGGTTCAG AGAAGAAGAA ATTCATCAGA GATTCTGCTG GTAATGTTTA TACTAAAAGC CAGCTTGATT TGCTTAAGAA GCTTCATGAG AAGTGTCAGT GTAATGATCG GATTGTGGAA GAAGAGAGTT CATGTAAACC TAAAACAAGG AGAAGATCTT TGAGTTCTGA AAGAGAACTT GAGAAGTATG AATCTAAACC TGTTCAGGGA TTGCTAGAGA GAGAGATAAG AAGGATCAAG AATCTAAAGG AGGAAACTTG CGATGACCCT GATAAGCAAA AGCAATCTTC TTTGAGTGAA ATTGAGAAGA CAAATGATAA GTATAATCAA ATAGATCTGA AGAGTGGGAG AGATTGTAAG AAGAGTGCAG AGATTAACCT TCAAGCTTGT GTGAATGAAG CTGCTGAAAC ATTTATTTGT TCCAAGGCGG AGGAGAAGGG GAAAGATCGG TCTAAGCAGT TCATGGAGGC GTTAGATATT CTAAGTTCGA ACAAAGAATT GTTCATTACA CTCTTACAAG ATCCTAATTC ATTCTCGAAA AAAGGTCAAG ACTTGGAAGG ATGTAAGGTA AAGGAACCGC GGGATAACTC TCCATCAAGG GCTGATGATT TGGATAACAT TGTTCTCTTG AAGCCTAGAT TATCAAGTTC GGTTGATGAT AAAGTGTACT TGAGATTCAA ACATCTGGCC AAGAAGTTGA AGCTCGTTGT TGGATCTAAC AAAGATAGCA ATCACGCAGA AAACAAACCT GAAGGTAGCG GTAAAGGTAG AGAAACCGAG GCTGCTGCTT TTAGAACAAG TGATGTTTCT ACAAGTACAT TTGGACATAG AAGCCCGGAG TCACCAGTGT TTAGGCGCAA AAAACGGGTT GAATCCGATG TTTTCAAGCT AAGTATCGAG AACGATGTTT TGCCAAGGAG ACTCATGGTA GAAAGGCAAC ATGAGAGATT AAATTCTTCA CCGGTTTATG AAGTTCCTTA TCAATTGAGT AGCTTGCAGA CAAAGCTCAA AGAAAGAAGA CAGAAGCTAG AGAAGAAAAG AGAGAGCTTC AAGTTGTGGT CTTTGGACAA AAACTGCGAG GTTTTTGATC CGAATCCATA CAATTCTAAT CTAAGGTCTC TCGACGGCAA TTGTACAGGT TCTGCTGAGT ACAAAAGTCT GAGAACTCAT GTAGAAGACG GATTCGTGGA AGATAGATGT CTTGAGAGCT CATTAGCAGA GTCGAATTCG AGCCTAGAAA GACAAGACTG CAACATTCAT GACCCGAAAC AGGAGCAGGA ACAACCGAGT CCTGTCTCTG TTCTTGAGAG GATTCATTTG GAAGATGAAA CAGTTATCCC CGGAAATGTG AAAATTTCTA ACCTTGAAGA GAAGATTGGA GTATCTTTTG ATGATTCCAA CATTGAACTT GTCGAAAAAG AATCCGTTCA TGAGTTTGTG AAAAAAGTTC TTGAAGCTTC AAGATTGAAT TGGACTAATC TTATGGCAAG GTGCAACGAA GAAACATCGC TACTCGATGA ATTCTCACAC GGTAATCACA ACGACCAGCT TCTTCTTGTT CTTGATTACA CCGACGAGAT TCTCCGCGAG ATTTACCGTC AAGACATCAA GTTTTGGCCT TTCTCGCCAT CGAAGAGCTC TAGAGTCGTC AATCTACAAT CATCCCTTAG AGAAGAAGAT CTGATTCACG AGACGATGAG ACATTTTGAC TGGAGTTTAC TCTGCTCCGA CTCTCCTACA AGATCATTGG ATCAGATCAT TGAAACTGAT ATAATAAAGC CATGTCTTTG GTTGGATTTT GGTGGTGAAT CTGAAGGTGT TGTGTCTGAT ATTGTGGAAA AGATTCAGCA ACAATTGGTG CTTGAGATCT CTCATGAGCT AAGAACAATG CAGAGGAGCA TATTATGTCG ATTAATCTGA ATTTCTTCGG ATATATTCCA ACATTTTTTT TGTCTGTATA AAAATGTTTA AAATTTGAGA ATCTTCTCTT CATTATTATT AGTTATCTAA ATTTAAAAAG ATTCGATCT 
Length2459
Protein Sequence
Protein Residue
Map Locationscaffold_2: 723286.. 726482
Download Sequence
A.thaliana
AGI-codeAT1G63670.1
DescriptionProtein of unknown function (DUF3741)
TAIR curator summary
Alias[TRM12][TON1 Recruiting Motif 12]
Gene coexpression
MR
MR Locus Description
1 Ahg317700 ARM repeat superfamily protein
2.82843 Ahg490773 TLD-domain containing nucleolar protein
3 Ahg490904 RNA-binding (RRM/RBD/RNP motifs) family protein
3.87298 Ahg494108 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
8.94427 Ahg487351 E3 ubiquitin ligase, putative
9 Ahg944149 Remorin family protein
11.225 Ahg950867 U5 small nuclear ribonucleoprotein helicase
11.2694 Ahg497310 DNA/RNA-binding protein Kin17, conserved region
12.49 Ahg494917 histidine triad nucleotide-binding 3
13.3417 Ahg492979 RAB GTPase homolog A1D
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression