Detail



ID : Ahg475066

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475066|fgenesh2_kg.2__196__AT1G62860.1
Sequence
ATGGTTGAAA AGGGATGTCA ACACGATGTC GTGGCCTTCA ACACACTGAT GAATGGTCTT TGCCGCGAGG GTCGAGTTCT CGAAGCAGTA GCTCTTGTTG ATCGGATGGT TGAAAATGGT CATCAACCTA ACGAGGTGAC GTATGGAACA ATTGTCAATG GAATGTGTAA GATGGGTGAC ACTGACTCTG CCTTGAACCT GCTTAGGAAG ATGGATGAAA GCCACATCAA AGCCGATGTT GTAATCTATA CTGCCATCAT TGATCGCCTT TGCAAAGACG GGCACCACAG CAAGGCTCAA AATCTTTTCA CTGAAATGCA TGACAAAGGA ATTTTTCCCA ATGTTCTCAC CTACAACTGT ATGATAGACG GTTGTTGTAG TTATGGTAAA TGGACTGATG CGGAGCAACT GCTACGTGAT ATGATCGAGA GCAATGTCGA CCCTGATGTT GTAACTTTCA ATGCATTGAT CAATGCATTT GTCAAAGAAG GAAAGGTCTT TGAGGCTGAA GAATTATACC GTGAGATGCT TGGAAGGAAT ATATTTCCTG ATACAATCAC ATATAATTCA TTGATCGATG GATTTTGCAA GCATAGTCGT CTAGATGATG CGAAGCACAT GTTTGATTTG ATGGTTAGCA AGGGCTGCTC TCCGAATGTA ATCACTATTA ATACTCTCAT AGGTGGATGC TGTAGGGCTA AGAGGGTAGA TGATGGAATT AAACTTCTCC ATGAGATGTT AAGAAGAGGA TTAGTTCCTG ATTCAGTTTC TTACAACACT CTTATTCACG GGTTCTGTCA AGCGGGGGAT CTTAATGCTG CTCAAGACCT TTTCCAGGAG ATGATTTCTC AGGTAAGATG GATCTTGATA CTGCTACTTA TAACATCATC ATCATCAATG GAATGTGCAA GGGTAATAAG GTGGACGAAG CATGGGATTT GTTCAATAGT CTCCCCCTCA ATGGTGTGGA AACTGATATC CAAACTTACA ATATATTGAC TTTTGAGTTT TGGAGATGAA TTTATATATA TACAGCTTTG GCTGCAGAGC TTCTAGTGTA GCATCTGGAG AAGTTTGCAA CTGAATGTCT AAGTCAAATT GAAGATAACC CTCTCTGATT AGCTTGGTGT GTTTGCTTTG CACTTTGCAG GATCATCAAT TGGAGGATGA 
Length1170
Protein Sequence
Protein Residue
Map Locationscaffold_2: 1356814.. 1358613
Download Sequence
A.thaliana
AGI-codeAT1G62860.1
Description
TAIR curator summarypseudogene of pentatricopeptide (PPR) repeat-containing protein
Alias
Gene coexpression
MR
MR Locus Description
14.7309 Ahg915640 topoisomerase II
15.906 Ahg893964 dicer-like 4
25.593 Ahg494638 Glycosyl hydrolase family 47 protein
31.0805 Ahg908040 P-loop containing nucleoside triphosphate hydrolases superfamily protein
35.4965 Ahg496317 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
37.4166 Ahg493953 HD domain-containing metal-dependent phosphohydrolase family protein
37.4166 Ahg331131
41.1825 Ahg936006 starch synthase 4
61.3514 Ahg949231 B-box type zinc finger protein with CCT domain
63.2139 Ahg921317 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression