| Annotation |
|---|
| Description | jgi|Araly1|475343|fgenesh2_kg.2__473__AT1G59720.1 |
| Sequence |
ATATTTCCCC TACAACAACT AAACTTATTA TCATCCAATG TCTATCAGTC TTCTGCTCCA CCCATTATCT CCTCATATCC AACCGGCTAA TTCTCCCTCA GCCTCCACCG CCGGTAACCA TCACCGACGT ATTCTCTCCT TAGCAGAAAC ATGTTCAGAC ATGTCTCAGC TCAAGCAACT CCACGCCTTC ACTCTCCGTA CTACTTACCC TGATGAACCC GCAACTCTGT TTCTCTACGG CAAAATCCTC CAGCTATCTT CCTCCTTCTC CGACGTCAAT TACGCGTTCC GGGTTTTCGA CTCCATTGAA AACCATAGCT CCTTTATGTG GAACACTCTT ATAAGAGCAT GTGCTCATGA TGTTTCAAGG AAAGAAGAAG CCTTTCTGCT GTACCGGAAA ATGTTAGAGA GAGGTGAATC GGCACCGGAT AAGCATACGT TTCCGTTTGT TTTGAAAGCT TGCGCTTATA TATTCGGGTT ATCGGAAGGG AAGCAAGTTC ATTGTCAGGT TGTCAAACAT GGGTTTAGTG GAGATGTGTA TGTGAACAAT GGTTTGATTC ATTTTTATGG ATCTTGTGGA TGTTTGGATT TAGCACGGAA AGTGTTTGAT GAAATGCCTG AGAGAAGTCT TGTTTCGTGG AATTCGATGA TTGATGCTCT GGTTCGGGTT GGGGAGTATG ATTCTGCGTT ACAATTGTTT AGAGATATGC AGAAATCGTT TGAACCAGAT GGTTATACGA TGCAGAGTGT TTTGAGTGCG TGTGCTGGTC TTGGATCTTT GTCATTAGGT ACTTGGGCAC ATGTGTTTCT GTTGCGAAAT TGTGATGTCG ATGTTGCTAT GGATGTTCTG ATTAAGAACT CGTTGATTGA AATGTATTGC AAATGCGGGT CGTTGAGAAT GGCTGAGCAA GTGTTTCAGG GAATGCGAAA ACGTGACTTA GCTTCATGGA ACGCAATGAT TCTAGGGTTT GCTACACACG GAAAAGCTGA GGAAGCTATG AATTGCTTCG ACTGTATGGT GAAAGAAGGC AAGAATGTTA AACCGAACTC TGTCACGTTT GTTGCCCTCC TCATTGCCTG CAACCACCGA GGCATGGTAA ACAAAGGGCG CCAGTATTTT GACATGATGG TCAGAGAATA TGGTATCGAA CCTGCGTTGG AGCATTATGG TTGTATCATC GACCTTGTTG CTCGTGCAGG CTACATTACT GAAGCTATTG ACATGGTGAT GAGCATGCCG ATGAAACCAG ATGCAGTGAT ATGGAGAAGT CTCCTTGATG CTTGTTGCAA AAAAGGCGCT AGTGTGGAGC TAAGTGAAGA AATTGCTAGA AATATTATCG GAACAATGGA AGATAACCAA AGCTCCAATA GTAACTGCAG TGGCGCATAT GTACTGTTGT CTAGAGTTTA TGCATCAGCT AGCCGGTGGA ACGATGTTGG AATCGTCAGA AAACTAATGA GTGACCATGG AATTAGAAAA GAGCCTGGAT GCAGTTCTAT TGAGATAAAT GGCATCTCCC ACGAGTTTTT CGCAGGAGAC ACGTCGCATC CTCAGACAAA ACAGATATAC CAACAGTTGA AAGTGATCGA CGACAGGCTA AGATCAATTG TGGATTCCAC CAATGACGGT AGCAAAGAGT ATTCCCTCCG GCTGCACAGT GAGAGACTTG CCATTGCTTT TGGTCTGATA AGCTTACCAC CTCAGACTCC AATCCGTATA TTCAAGAATC TACGTGTCTG CAGCGATTGC CATGAAGTTA CTAAACTGAT ATCAAAAGTC TTCAACACTG AGATCATCGT GAGAGACCGT GTTCGGTTCC ATCATTTCAA AGACGGATCC TGCTCTTGTT TAGACTACTG GTAGCTAAAA CCTAGTCGCA GTAATTGAAA GAGATTGAGC ATTAGAGTGG GACAAAAGGG AAAGAATGGT ATATCTAAAT CATAAGTTTG GTAATCAAGC AGTATCTGTA AG |
| Length | 1972 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 3440180.. 3442218 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G59720.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity. |
| Alias | [CRR28][CHLORORESPIRATORY REDUCTION28] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.7082 |
Ahg925692 | formyltransferase, putative |
| 10.9087 |
Ahg483374 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein |
| 19.6214 |
Ahg939075 | Mitochondrial transcription termination factor family protein |
| 29.4109 |
Ahg893370 | peptide deformylase 1B |
| 33.5559 |
Ahg920418 | FAD/NAD(P)-binding oxidoreductase |
| 35.4965 |
Ahg480210 | OBP3-responsive gene 4 |
| 38.223 |
Ahg484762 | Pentatricopeptide repeat (PPR) superfamily protein |
| 44.5084 |
Ahg952162 | |
| 47.1805 |
Ahg950230 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 48.3322 |
Ahg930544 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|