| Annotation |
|---|
| Description | jgi|Araly1|893370|Al_scaffold_0006_1366 |
| Sequence |
ATGGCCGTCT GTAACTGCTT CCTCCAAGCT CCACCACTCT CTCGCTTATT CTTACCGGTT TTATCTCGCC GAGCTACTAC ACTCTCTGCC GGTTATGGTC GGCTCAAATC CACCGTCATG TTCTGCTCTA CTGGGAACCG GACCAGTCTT CTGATATCTC CGGTTCGCGC TGAAGTAAAG CGCGTCTCAC GTAAAGACGT TGAAGTAGCT TCAGCTTCTG ATCTTCAATT TGAGACTCCT TTGAGGATTG TTGAGTATCC GGATCCTATA CTACGGGCTA AGAACAAGAG GATTGGTGTT TTCGACCAGA ATTTGAAGAA CTTGGTTGAT GCTATGTTTG ATGTTATGTA CAAAACGGAT GGTATTGGGC TCTCAGCACC ACAAGTAGGT CTCAATGTTC AACTTATGGT GTTTAATCCA GCTGGGGAGC CTGGTGAAGG AGAAGAAATT GTTCTTGTAA ATCCGATTAT CAAGAAATAT TCCGATAAGT TAGTACCGTT TGATGAAGGA TGCCTATCCT TCCCCGGGAT CTATGCTGAA GTAGTTCGAC CACAATCTGT CAAGATTGAT GCAAGGGACA TTACTGGTGA AAGATTTTCA ATTAGTCTAT CTCGTTTACC TGCACGAATC TTTCAGCACG AATATGACCA TCTGGAGGGA GTTCTCTTCT TTGACAGAAT GACGGATCAA GTTCTTGATA GCATTCGTGA AGAGCTAGAG GCCCTAGAAA AGAAGTACGA AGAAAAAACT GGATTGCCAA GCCCTGAAAG AGTACAAGCA CGACAAAAAA GGAAAGCAGG AGTTGGTTTT GGCAAACGTT GA |
| Length | 822 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 5692050.. 5693661 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G14660.1 |
| Description | peptide deformylase 1B |
| TAIR curator summary | Encodes a peptide deformylase PDF1B. The crystal structure has been determined at a resolution of 0.24 nm (Biochem J, 2008, vol 413:417-427). |
| Alias | [ATDEF2][DEF2][PDF1B][peptide deformylase 1B] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg496512 | Radical SAM superfamily protein |
| 9.38083 |
Ahg491679 | FAD/NAD(P)-binding oxidoreductase family protein |
| 11.1355 |
Ahg487232 | 3'-phosphoinositide-dependent protein kinase 1 |
| 11.4891 |
Ahg478773 | Ribonuclease III family protein |
| 18.3303 |
Ahg477231 | Rubredoxin-like superfamily protein |
| 18.4932 |
Ahg326886 | DEAD box RNA helicase (RH3) |
| 21 |
Ahg930087 | RNA methyltransferase family protein |
| 21.4476 |
Ahg900749 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 23.6643 |
Ahg482988 | Radical SAM superfamily protein |
| 25.8457 |
Ahg480475 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
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| Growth Chamber expression |
|
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