Detail



ID : Ahg475347

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475347|fgenesh2_kg.2__477__AT1G59650.1
Sequence
AAGAAAAAAA GCTTCTTCTT CACCAAATTA TTTGTCTAGT TGTCTGTGTC TCATTTACCA TATTTCTCTC TAAATATTTC CCATTACTGG ATTTGAAGAT CGTGTCTGGC AGATTCTATC TGATTTCTGA TCAGAAGAAG AAGAGAGAAG AAAAAGGAAA CAACTTTTTC TCTTTCTCTC TCTACAAGTT CTGGGTTTTT AAGAGAAAGA GATCAAGGAG ACAGCTTTCT CTCTCTCTCT ATCTCTAAAA GTTCTGGGTT TAGAAAGAGA TCTTATATGT TGAATTTGTG ATCAGAGAGA GAAGAGAGAG AGATGGGAGG TTGCGTGTCA ACGCCTAAGA GCTGTGTAGG AGGTAAAATA AGGTCAAGCA AAAGGAGAAA GACTCGGACA AGACGAAAGA TTCAGAAGAA GAGAGTTGTT TCTTCTTCTC GCTTATCTGA CGGATCTTTC GATAATAATC ACACTTTCAG AGCAAGTGTT GATGAAGCAT GGTTTGATTC CAATCTCGCC TTTGAAACCG ATTGTGATGA TGATTTTCAC AGTGTTCAGG AAGATATTTT GTCAGTAAAC GGAGGTGAGC GTATCTCAGT CTCGAGTATG TCATCTGTTA GAGACTCTAA CCTTGGTGGT TCCGCTCGGA ATTCTCTAAG CGATGTCATT TCACAATCAA AAGCAGAGAG TGCTTTGATT GACGCTAAGC AGCCTGTTTT TATTGACGAG ATATCTTCAA ATGCTGGTGA TAGCTCTAGA AAAGATGAAG GATTGTTGGA AAACTGCGGG ATTCTTCCGA GCAATTGTTT GCCATGTCTT AATTTAACTG TTCACTCTAT TGAAAAGAGA AGGTCTTTAA GCTCTAGCCC TCCGAGTACG AGGAAAAAAG CTGCGCTTAA ACTATCTTTC AAGTGGAGAG AAGGGCACGC TACCGGTCCT TTATTTTCTA CAAAAATGCA GTTGCAGAGA CCGATGGCAG GTTCTCAGGT TCCGTTTTGT CCGCTCGAAA AGCAAATGTT CGATTCTTGG TCAATTATTG AGCCAGGTAG TTTCCGGGTT CGTAGCAAAA CTTATTTCAG AGAAAAGAAG AAAGAGTTTG CACCAAACTA TGCTGCATAT AATCCATTTG GTGTCGATGT ATTTTTATCT CAACGTAAAG TAAACCATAT AGCGCAATAC GTGGAGCTTC CTATTGTTAC CACCACCCCG ACCAAGCTCC CATCAATCCT TGTTGTAAAT GTTCAGATTC CATTGTATCC AGCTGCAATT TTTCAAGGTG AAACTGATGG AGAAGGAATG AATTTTGTTT TATACTTTAA ACTTTCGGAT AATTATTTAA AGGAGCTTCC ACCTCATTTT CAAGAAAGCA TTCAGAGATT ACTAGATGAT GAGGTTGAGA AAGTTAGAGG CTTTACCATG GATACAAATG TACCCTTTAG AGAACGGTTA AAGATATTGG GTCGTGTTGC GAATGTAGAT GATCTCCAAT TGAATGGCGC AGAGAAAAAA CTTATGAATG CTTATAACGA AAAACCTGTG CTTTCACGTC CACAGCACGA GTTCTACTCG GGTGAAAATT ACTTTGAGAT TGATATCGAT ATGCATAGAT TCAGTTATAT ATCGCGGAAA GGATTTGAAG CATTTTTAGA CAGGCTCAAG CACTGTGTTC TTGATGTTGG ACTCACAATT CAGGGGAATA AACCAGAGGA ATTACCGGAG CAGATTCTGT GTTGTGTCCG GTTAAACGGG ATTGATTACA TGAATTATCA TCAGTTAGCT CTTAGTCAAG AAGTCCTATG ATAAAAAGCA AAGACCTCGC CGGAATTTTT TGTTGTTGTT GTTTATCTTC TTTTCTTTTG TTCCTCAAGA ACACAAAATC TAAGAGATTT TTCGGTTTGA AGAAGAACTC AATAATGGAA GCATGAATAT ATAAACAATA CATCATTCCG AAACATGATC ATACCTCGGA GATTGCCTAC GACTCTGTAC AGTGGCCAAT ATTTCGACTA GTGCTCATCA TAAATATCAT AACTGAATGA GAAATCACAC ACAACAGTAG 
Length2050
Protein Sequence
Protein Residue
Map Locationscaffold_2: 3487376.. 3490550
Download Sequence
A.thaliana
AGI-codeAT1G59650.1
DescriptionProtein of unknown function (DUF1336)
TAIR curator summaryEncodes CW14.
Alias[CW14]
Gene coexpression
MR
MR Locus Description
8.94427 Ahg941041 PHD finger family protein
16.6132 Ahg477464 Regulator of chromosome condensation (RCC1) family protein
17.8326 Ahg938385 basic leucine zipper 25
21.3307 Ahg950030 homogentisate 1,2-dioxygenase
32 Ahg472032 Protein kinase superfamily protein
32.8786 Ahg494463 Root hair defective 3 GTP-binding protein (RHD3)
52.8204 Ahg487314 RING/U-box superfamily protein
57.7235 Ahg926692 Putative integral membrane protein conserved region (DUF2404)
62.7375 Ahg485678 ser/arg-rich protein kinase 4
64.3739 Ahg492904 Ras-related small GTP-binding family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression