| Annotation |
|---|
| Description | jgi|Araly1|485678|fgenesh2_kg.5__1670__AT3G53030.1 |
| Sequence |
TCTCTGCACA AGCTTCCAGA AAAATCAAAT CAAATCAAAA GAGAGAGAGA GAGAGATCCA AGAAATTGGG TTCAATCGTC GCCGGATATT CCAAGAGTTG AGAGTTTAGT TTGTCTCCCG TTGCGTCTAG ATTTAGTGAA TATGGAGGTG GAGAAGTGGA ACAGCGACGG CGGTGAATAC ACGTCGGAGG ACGAAGGTAC GGAGGATTAC CGGCGCGGCG GTTACCACTC CGTTCGGATC GGTGACTCAT TCAAAAACGG CCGGTATGTT GTTCAGAGCA AACTCGGTTG GGGTCATTTC TCTACTGTTT GGCTCGCGTG GGATACTCAA TCCTCTAGAT ATGTGGCTTT AAAGGTGCAA AAGAGTGCTC AGCATTATAC TGAAGCTGCC ATGGATGAGA TAACTATATT GCAACAGATT GCAGAGGGAG ACACTGATGA TACCAAATGT GTTGTGAAGC TTTTGGATCA TTTTAAACAC TCAGGTCCGA ATGGGCAGCA TGTATGTATG GTTTTTGAGT ATTTGGGAGA TAATCTGTTA ACGCTGATTA AGTATTCTGA TTACCGTGGC TTGCCTATTC CGATGGTTAA GGAGATTTGT TATCATATGT TGGTTGGGTT AGACTACTTG CATAAACAGC TCTCGATTAT ACATACTGAT CTGAAGCCTG AGAATGTTTT GTTACCGTCA ACGATTGATC CATCTAAAGA TCCGAGGAAG TCTGGAGCTC CTCTTGTTCT CCCCACTGAT AAGGATAAGA CAGTTGTTGA CTCCAATGGG GATTTTGTCA AGAATCAAAA GACAGGTAGT CATAGAAAGG CAAATATTTC GGCTCATGGA AATGCAGAGA GTAAGGGCAA TACTGAATCT GACAAAGTTC GTGGAGTGGG ATCACCGGTT AATGGAAAAC CAAGAGCTGC AGAAAAATCG GTTGAAGAAG ATTGTCCTTC TACTTCTGAC ACAAATGGAC TAGATGGCAG CGAGAAAGGA AAGCAAGGTG GTAAGAAAGG GAGTCGATCA AGTAGAAGGC ACCTTGTGGC ATCTGCTGAC CTCAAGTGTA AACTGGTTGA CTTTGGTAAC GCGTGTTGGA CATACAAACA GTTCACAAGC GACATTCAAA CGAGACAGTA TAGGTGCCCA GAAGTAATCC TTGGATCTAA ATACTCTACA TCAGCAGATC TCTGGTCATT TGCGTGCATA TGTTTTGAAC TTGCCACTGG AGATGTACTG TTCGATCCCC ATAGTGGAGA CAATTATGAT AGAGATGAGG ACCACTTGGC TCTGATGATG GAGCTTCTTG GGATGATGCC ACGCAAGATA GCATTGGGAG GCCGCTACTC CAGAGATTTC TTTAACAGGC ATGGTGATCT TCGACACATC AGAAGACTGC GTTTCTGGCC CATGAACAAA GTCCTGACCG AGAAGTACGA GTTCAGTGAG CAAGATGCAA ATGACTTGAG TGATTTTCTT GTTTCGATTC TTGATTTTGT CCCCGAGAAA CGACCAACTG CAGCTCAGTG TCTGTTACAT CCCTGGATCA ACTCTAGTTC CCGCTCTATA AAACCTTCAC TCTCACCTAA AGACCAAAAT TCCGAAGACA AGCTTGATAC AGAGGAAAAG AAGAGGGAGA ATGAGGAGCA AGAAGCTGTG GAAGTTAAAA TGGGGAACGT TGTCATATCA TCCTCAGACT CTAAACCAGG TATGAGCCAA AGCTCCACTC TTAAGCAAGC GATTGACTTC TGAGATTTGT CTGTTCGATA TCTGAGCTCT GTGAACCACT CAAGCTGTTT AATAGAAAGA ACAATTTCAT ATATGCAGAG TGGTATCTTG TTTGTGTACT TCTACGTATC CAAATACCAA TATTCACATT T |
| Length | 1871 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 15515984.. 15517828 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G53030.1 |
| Description | ser/arg-rich protein kinase 4 |
| TAIR curator summary | Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. |
| Alias | [SRPK4][ser/arg-rich protein kinase 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg474620 | RNI-like superfamily protein |
| 6.32456 |
Ahg489858 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 24.6779 |
Ahg497296 | cytochrome P450, family 71 subfamily B, polypeptide 7 |
| 26.8328 |
Ahg487229 | UDP-Glycosyltransferase superfamily protein |
| 27.4591 |
Ahg894082 | |
| 28.3725 |
Ahg488026 | SCP1-like small phosphatase 5 |
| 30.9354 |
Ahg939714 | ATPase, AAA-type, CDC48 protein |
| 32.4037 |
Ahg491138 | Transducin/WD40 repeat-like superfamily protein |
| 32.6803 |
Ahg475810 | HEAT repeat-containing protein |
| 37.3497 |
Ahg484289 | 18S pre-ribosomal assembly protein gar2-related |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|