| Annotation |
|---|
| Description | jgi|Araly1|475392|fgenesh2_kg.2__522__AT1G58370.1 |
| Sequence |
ATCAAAATCC AGACAAGAAA TTAAGAGAAA GCATGGAGAT TTCAAGAAAA GACAATGAAG AGCCTGAAAA ACAGAACAAC AACAATGTAG CATCTATTAT TGGTTCGGAT CGCACCAATG TAATTGTGAA TCATGACTTC TCTTCCGGGA TGCATTCGTG GCATCCGAAT TGCTGCGAGG CCTTTGTTGT CACCGCTGAG TCTAATGTCT CTCACGGTGT TTTAGACCCG TCAAAGTGCG GTACCTACGT AGCTGTCACA AACCGGAAAG AAACTTGGCA AGGCTTGGAG CAAGACATCA CAAGCAGAGT GAAACCTTGT TGTCCTTATA AAGTTTCTGC AACTGTTGCT GTGTCTGGAC CTGTTCAAGG ATTGGTAGAG GTTATGGCCA CCTTGAAGCT CGAAAACGGA CAATCGCAAA CAAACTATCA GTTTATCGCA AAAGCTTGTG TCTTCAAGGA GAAGTGGGTG ACACTAGAAG GCATGTTTTC GTTACCGAGC ATAACAGAAA AAGTTGTTTT CTATTTGGAA GGCCCGTCAC CGGGGATCGA TCTCCTCATA CAGTCAGTTA CCATTCATAG CGAAAGCGAA CTTGAGCTGG ACCGTGTTAC TGCTGAAGAT GAGACTATTG TAGTGAACCC AAACTTTGAA GATGGACTAA CTAACTGGTC TGGGAGAAGC TGCAAGATTG TGTTGCATGA CTCAATGGCT GATGGAAAGA TAGTACCAGA ATCCGGGAAA GTTTTTGCTT CGGCTACAGA ACGCACGCAG AACTGGAACG GTATTCAACA AGAGATCACC GGGAAAGTTC AGAGAAAACG TGCCTATGAG GCAACCGCGG TTGTTCGTAT TTATGGAAAC AATGTGACTA CTGCTACAGT ACAAGCTACT CTATGGGTCC AGAATCCAAA TCAACGTGAT CAATACATTG GCATTTCCAC TGTGCAGGCA ACAGACAAAG AGTGGGTACA TTTAAAAGGG AAGTTCCTCC TCAACGGTTC TGCGTCGCGG GTAGTCATTT ACATTGAAGG TCCGCCTCCA GGAACAGATA TTCTCCTCAA TAGCTTCACT GTGAAACACG CCGAGAAAAT TCCTCCTTCA CCACCCCCGT CTATTGAGAA TCCTGCATTT GGGGTAAACA TACTCACAAA TAGCCACTTA AATGATGATA CGACCAACGG CTGGTTTCCA TTAGGGAACT GCACGCTAAG TGTCGCGGAA GGCTCACCTC GAATCCTTCC TCCGATGGCA AGAGACTCGC TTGGCCCACG CGAGCCTCTA AGTGGCCGCT ATATACTCGC GACTAACCGA ACACAGACAT GGATGGGTCC AGCACAAATG ATCACTGATA AACTTAAGCT TTTCTTGACA TACCAAATAT CAGTTTGGGT CAAAGTCGGT TATGGCATTA ATAGTCCACA AAATGTTAAT GTCGCACTTG GTATCGATGG CCAATGGGTA AACGGAGGAC AAGTCGAGAT CAACAATGAT AGATGGCATG AAGTTGGCGG TTCTTTCCGA ATCGAGAAGC AGCCATCTAA GGCTTTGGTT TATGTTCAAG GCCCTTCTTC CGGCATTGAT CTAATGGTTG CTGGATTGCA GATTTTCCCG GTCGATCGAC TTGCGAGAAT CAAACATTTG AAAAGACAAT GTGACAAGAT CCGTAAGCGC GATGTTATCC TCAAATTTTC TGGTGTTGAT TCTAGCAAAT TGTCTGGAGC TACGGTTATA GTTCGACAAA TAAGAAACAG CTTCCCGGTG GGGACTTGCA TAAGCAGATC AAATATAGAT AACGAAGATT TCGTCGATTT CTTCTTGAAG AACTTTAATT GGGCGGTTTT CGCTAACGAA TTGAAATGGT ACTGGACGGA ACCAGAACAA GGGAAGCTTA ATTACCAAGA CGCAGATGAT ATGCTCAACT TGTGTAATAG CAACAACATA GAAACAAGAG GACATTGTAT CTTTTGGGAA GTTCAAGCAA CTGTTCAGCA ATGGATCCAA AACATGAACC AAACCGACTT AAATAACGCG GTCCAAAACC GCCTAACCGA TCTTCTAAAC CGGTACAAGG GGAAATTCAA ACATTACGAC GTGAACAATG AGATGTTACA CGGATCATTC TATCAAGACA AGCTAGGAAA AGACATAAGG GTCAACATGT TCAAGACCGC GCACCAACTA GACCCTTCTG CGACATTGTT CGTGAACGAC TACCATGTAG AAGACGGGTG TGACCCAAAA TCCTGCCCTG AAAAGTACAC GGAACTCATT CTTGACCTGC AAGAAAAGGG TGCGCCAGTA GGCGGAATCG GGATTCAGGG CCATATTGAT AGTCCAGTAG GTCCAATCGT ATGTTCAGCT CTAGACAAAC TAGGAATCCT CGGTTTACCG ATATGGTTCA CGGAAACGGA TGTGTCCTCT GTCAATGAGC ACATAAGGGC AGATGATTTA GAAGTAATGA TGTGGGAAGC TTTCGGACAT CCGGCGGTCG AAGGTATAAT GTTATGGGGA TTTTGGGAAT TGTTCATGAG CAGAGACAAC TCTCATTTGG TGAATGCAGA AGGAGATGTT AATGAAGCTG GCAAAAGGTT TTTGGCTGTG AAAAAAGATT GGCTCTCTCA TGCCAATGGA CATGTTGACC AAAACGGTGC GTTTCCGTTT AGAGGGTATA ATGGAAACTA TGCCATTGAA GTGATTACTA CTTCATCTAC TAAGGTTCTA AAAACGTTTG TTGTTGAAAA GGAAGATTCG TCTCAGGTTA TTACTGTTGA TCTTCAAGGG TTGTGATGCT TTTGTGTTGT ACATGTGTTC ATGTATGTAT GTATGTCTAG ATTTAGAATT TGCTGAAACT GTGGTGTTTG TTTATTCAAA ACAAAAAAAA AGTCTCT |
| Length | 2887 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 3777939.. 3795792 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G58370.1 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| TAIR curator summary | Encodes a protein with xylanase activity. |
| Alias | [ATXYN1][RXF12][ARABIDOPSIS THALIANA XYLANASE 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.32456 |
Ahg481562 | non-specific phospholipase C2 |
| 13.4164 |
Ahg472755 | Agenet domain-containing protein |
| 18.1659 |
Ahg487528 | HXXXD-type acyl-transferase family protein |
| 30.7246 |
Ahg470222 | beta-xylosidase 2 |
| 33.2265 |
Ahg946315 | receptor like protein 51 |
| 34.4238 |
Ahg484584 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 39.4968 |
Ahg478905 | Plant protein of unknown function (DUF641) |
| 43.8178 |
Ahg485694 | Pectin lyase-like superfamily protein |
| 50.1896 |
Ahg490544 | xylem serine peptidase 1 |
| 55.6237 |
Ahg945110 | MATE efflux family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|