Detail



ID : Ahg484584

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484584|fgenesh2_kg.5__576__AT3G27960.1
Sequence
AAAACATATA AGGACAGTGA AAGGGTTTGT TCATAAATGT TTGTTGCTTC ATCTTTCTCA TTATAGAGAA TATATATTAG CTATGAGATT ATGAAAGTGA AGATATACAA ACGAACACCT AAAAGTGAAA AGTACAAGAC ACCAAATCCT TCATTTTTTT CTCTTACACA AACCACACTA AGTTACCAAA AAACAGAATC TGTTCTGTTT TTTGCCTTCT TGCAGATTTC TTCAGAGTCA GAGAGAGACA AACATAAAGG TTCGATTTTT ATCTCTTAAC GGCCATGGAC GTAGGAGAGA GCAATGAGAG GGGAAAAGAC GATTCTGCCC TTCAAGCTTC TCCGAGGAGT CCTCTGAGCT CTATAGATCT TGCAATTGAT GGAGCTATGA ATGCTTCTAT TGAGCAGTTG TATCATAACG TTTGTGAAAT GGAGAGTTCT GATGATCAGT CTCCGTCGAG GGCGAGTTTT ATTTCGTATG GAGCTGAATC TAGGATTGAT TTGGAGTTGA GGCATTTGGT TGGAGATGTG GGAGGAGAAG GAGAGAGGAA GAAAGAGATT ATCTTGGAGA AGAAGGAAGA GAGTATTGGA GGAGGTAGCT TGAGTCAGAA GAAACCTGTT GAATCTCTTT CGAATGGTAA GAAGGTTGCG AAAACGAAGA TTCTTGGTTC GAGGATCTCT TCGAGGAAAT CGCCGGATTT GGGGAAGGTT TATGTGGATG AGGAGAGTCC TGAGCTTGGG GTGTTGTTGT TGAAGCAAGC CAGAGAGTTG GTTTCTTCTG GTGAGAATCT GAATAAGGCT CTTGATTTGG CGTTGAGAGC GGTGAAAGTG TTTGAGAAAT GTGGGGAAGG AGAGAAACAA TTTGGGTTGA ATTTGGTGAT GTCTTTGCAT ATCTTGGCAG CGATATATGC GGGGTTAGGG AGATACAATG ATGCGGTGCC TGTTCTTGAG CGTTCTATTG AGATACCGAT GATTGAAGAT GGGGAGGATC ACGCGTTGGC GAAATTTGCA GGGTGTATGC AGCTTGGTGA CATGTATGGT TTGATGGGTC AGGTGGAAAA TTCGATTTTG CTATATACAG CGGGATTGGA GATCCAAAGA CAAGTTCTTG GAGAATCGGA TGCACGAGTT GGAGAGACTT GTAGGTACTT AGCTGAAGCT CATGTTCAAG CAATGCAGTT TGAAGAAGCC TCGAGGCTTT GTCAAATGGC GTTGGACATT CACAAAGAAA ACGGGGCTGC CACTACGGCT TCGATTGAAG AAGCTGCGGA TAGAAAACTC ATGGGACTTA TCTGCGATGC GAAGGGAGAT TACGAGGTTG CGCTGGAGCA TTATGTTTTG GCAAGCATGG CAATGTCATC TCAGAACCAA AGAGAAGATG TTGCCTCTGT AGATTGCAGT ATTGGTGATG CTTACATGTC GCTAGCTCGG TTTGATGAAG CGATATTCGC ATATCAGAAG GCTTTGGCTG TGTTTAAGCA AGCCAAAGGT GAGACTCATT CCTCTGTTGC TTTGGTTTAC GTCAGGCTTG CTGACTTGTA CAACAAGATT GGGAAATTAC GCGATTCCAA ATCGTACTGC GAAAACGCTC TTAAGATTTA CCTAAAACCG AGTCCGGGAA CTCCTATGGA AGAGGTTGCC ACGGGTTTTA TAGAGATTTC TGCGATATAT CAGTCGATGA ACGAACTTGA TCAATCTCTT AAGTTGTTGA AGCGGGCGTT GAAGATATAT GCAAACGCTC CAGGTCAACA GAACACGATT GCAGGTATTG AAGCTCAAAT GGGTGTGATT TCTTACATGA TGGGTAATTA CCCCGAGTCC TACAACATAT TCAAGAGCGC GATATCAAAG TTCCGCAACA GCGGAGAGAA AAAAACAGCT CTTTTTGGGA TTGCTCTGAA TCAGATGGGA CTAGCTTGCG TTCAGCGTTA TGCGATCAAT GAAGCTGCAG ATTTGTTCGA AGAAGCAAAA ACCATTCTCG AGAAAGAGTA TGGACCGTAC CATCCCGATA CATTAGCAGT ATACAGTAAC CTCGCCGGAA CATACGACGC AATGGGAAGG TTAGATGATG CTATAGAGAT ATTGGAGTAT GTTGTTGGGA CAAGAGAAGA GAAGCTCGGG ACGGCAAATC CCGAGGTTGA GGACGAGAAA CAGAGGCTTG CTGCGTTGTT AAAAGAAGCT GGAAGAGGAA GGAGTAAAAG AAACAGAGCA CTTCTTACTC TTTTGGACAA AAACCCTGAA ATTGCAAATG GACAGAGACC GGTTTATTGA TGAACCGGAT TACGGTCCGG TTAAAATGTA TATATATACG ATATACGAAT TCAGCTACGG TACTTTACAC GGTCGAGAGA GAAGG 
Length2355
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3969561.. 3972221
Download Sequence
A.thaliana
AGI-codeAT3G27960.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[KLCR2][kinesin light chain-related 2]
Gene coexpression
MR
MR Locus Description
3 Ahg497051 Leucine-rich repeat (LRR) family protein
3.60555 Ahg945110 MATE efflux family protein
8.48528 Ahg931262 Leucine-rich repeat (LRR) family protein
11.6189 Ahg472553 ARM repeat superfamily protein
15.748 Ahg914113 Protein of unknown function (DUF1005)
18.7617 Ahg479485 Protein of unknown function (DUF1005)
20.6398 Ahg919773 Protein of unknown function (DUF1005)
20.664 Ahg475599 photosystem II reaction center protein G
22.0454 Ahg471170 xyloglucan:xyloglucosyl transferase 33
23.9165 Ahg905564 Leucine-rich repeat (LRR) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression