Detail



ID : Ahg945110

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945110|scaffold_701339.1
Sequence
TCACCATCAC CATCACCGTC ATGTGTAACC CATCAACAAC AACAACCACC GGTTCAGAGA ACCAAGAATC TCGAACCGGA ATCTTCCTCG ATCTCTTCTC GATCAATAGC TTTGAACCCA CAAAGAGAAA TCTCCGGCAT TGCGAGAACA GAGGATCTCC TCTTATGGCA GAAGCTGTAA CAGAGGCGAA ATCTCTCTTC ACGCTAGCTT TTCCGATCGC CGTGACGGCT CTAGTCCTCT ACCTACGCTC CGCCGTATCA ATGTTTTTCT TGGGTCGACT AGGTGACCTC GAATTAGCCG CCGGTTCACT CGCCATTGCC TTTGCTAACA TAACCGGTTA CTCTGTTTTA TCCGGTTTAG CACTTGGTAT GGAACCACTC TGTTCTCAAG CCTTCGGTGC TCACCGCTTC AAACTCCTCT CCCTAACCCT CCATCGAACC GTGGTTTTTC TCTTGGTTTG TTGCGTACCG ATCTCGGTTC TCTGGTTAAA CGTCGGCAAA ATCTCGGTTT ACCTTCACCA AGACCCCGAC ATCGCTAAAT TAGCTCAGAC ATATCTCATC TTCTCCCTCC CTGATCTTCT CACCAACACT CTTCTCCATC CAATCAGAAT CTACCTTCGT GCTCAAGGCA TCATTCACCC CGTAACCCTA GCTTCTCTCT CCGGCGCTGT TTTTCACCTC CCGGCTAATC TTTTCTTAGT CTCTTACCTC CGTCTTGGTC TAACCGGCGT AGCAGTCGCT TCCTCTATCA CAAACATCTT CGTCGTAGCT TTCCTCGTTT GCTACGTCTG GGCGAGTGGT CTCCACGCGC CTACATGGAC TGACCCGACC CGTGATTGTT TCCGCGGGTG GGCTCCGTTG CTGCGTCTCG CGGGTCCGAG CTGTGTCTCC GTGTGTTTGG AGTGGTGGTG GTACGAGATC ATGATCGTTT TGTGTGGTTT GCTCGTGAAT CCAAGATCGA CGGTGGCTGC TATGGGTGTT TTGATCCAGA CGACGTCGTT TCTTTACGTT TTCCCGTCTT CTCTTAGCTT TGCTGTCTCA ACTAGAGTCG GGAACGAGCT TGGAGCGAAC CGTCCCAAGA CGGCGAAGCT AACAGCCACG GTGGCTATCG TTTTCGCGGC GGTCACAGGG ATTACAGCGG CGGCGTTTGC TTACTCAGTC AGAAACGCTT GGGGGAGGAT ATTTACCGGA GACAAAGAGA TACTCCAGCT AACAGCGGCG GCGTTACCGA TATTGGGTTT ATGCGAGATC GGAAACTGTC CTCAGACGGT GGGATGCGGA GTCGTGAGAG GAACAGCACG GCCGTCAACG GCGGCGAACG TGAACTTGGG AGCGTTTTAT CTGGTGGGCA TGCCGGTCGC AGTGGGTCTC GGGTTTTGGG CCGGAATTGG GTTTACTGGG CTTTGGGTAG GACTACTTGC GGCGCAGATT AGCTGCGCAG GTCTTATGAT GTACGTTGTG GGGACCACAG ATTGGGAATC GGAGGCTAAG AAGGCGCAGA CGCTAACGTG CGCCGAGACT GTAGAGAATG ATATTATTAA GGCGGTGGTG GCGAACACTA TAGGTGACGA CGGTGAGTGC GATGAGGCTG AGCCGTTGAT TCGCATCACG GTGCTTTATT AATATTAATT AAGATAAAAA AGT 
Length1643
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5064677.. 5066326
Download Sequence
A.thaliana
AGI-codeAT4G29140.1
DescriptionMATE efflux family protein
TAIR curator summary
Alias[ADS1][ACTIVATED DISEASE SUSCEPTIBILITY 1]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg484584 Tetratricopeptide repeat (TPR)-like superfamily protein
11.1803 Ahg888149
34.0294 Ahg927355 organic cation/carnitine transporter 2
47.6235 Ahg485612 plant U-box 22
55.6237 Ahg475392 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein
63.498 Ahg490604 SKU5 similar 9
66.3928 Ahg471274 PLAC8 family protein
69.5414 Ahg476326 ATP-binding casette family G25
75.0467 Ahg497051 Leucine-rich repeat (LRR) family protein
79.8436 Ahg943674 transducin family protein / WD-40 repeat family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression