Detail


ID : Ahg475500

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475500|fgenesh2_kg.2__630__AT1G64970.1
Sequence
AAGAAAAATG GTCCAATGTA ATAATTTCTG ACTTAGTCAC GTTTCTTTGT TTCTCCAAAC GGCCATAAAT GAAAGCGACT CTAGCAGCAC CCTCTTCTCT CACAAGCCTC CCTTTTCGAA CCAACGCTTC TTTCGGCTCA CCGTCGCTTC TCTTTCGGTC TCCATTATCT TCAGTCTCTA TGACAACAAC AACGGCGCGA GGGAACGTGG CTGTGGCCGC TGCTGCGACA TCCACCGAGG CGCTAAGAAA AGGAATAGCG GAATTCTACA ATGAAACTTC GGGTTTGTGG GAAGATATTT GGGGAGATCA CATGCATCAT GGCTTTTATG ACCCTGATTC TTCTGTTCAA CTCTCTGATT CTGGTCACCG GGAAGCTCAG ATCCGAATGA TTGAAGAGTC TCTCCGTTTC GCCGGTGTTA CTGATGAAGA AGAGGAGAAA AAGATAAAGA AAGTAGTGGA TGTTGGGTGT GGGATTGGAG GAAGCTCAAG GTATCTTGCT TCTAAATTTG GAGCCGAATG CATTGGCATT ACTCTAAGCC CTGTTCAGGC CAAGAGAGCC AATGACCTCG CGGCTGCTCA ATCACTCTCT CATAAGGTAT CTTTTCAAGT TGCGGATGCG TTGGATCAGC CATTCGAAGA TGGAAAATTC GATCTGGTGT GGTCGATGGA GAGTGGTGAG CATATGCCTG ACAAGGCCAA GTTCGTGAAA GAGTTGGTAC GTGTGGCGGC TCCAGGAGGA AGGATAATAA TAGTGACATG GTGCCACAGA AACCTATCCA CCGGGGAGAA AGCTTTGCAG CCATGGGAGC AAAACATCTT GGACAAAATC TGTAAGACAT TCTATCTCCC GGCGTGGTGC TCCACCGATG ATTATGTCAA ATTGCTGCAA TCCCATTCTC TCCAGGATAT TAAGTGTGCG GATTGGTCAG AGAACGTAGC TCCTTTCTGG CCTGCCGTTA TACGGACTGC ACTAACATGG AATGGCCTTG TGTCTCTGCT TCGTAGTGGT ATGAAGAGTA TAAAAGGAGC GTTGACAATG CCATTGATGA TCGAAGGTTA CAAGAAAGGT GTCATTAAGT TTGGCATCAT CACTTGCCAG AAGCCCCTCT AAGTCTAAAG CTATACTAGG AGATTGAATA AGAGTCTCAT GTGAATGCAT GAGATTCCTT AAAAACGTCA ATGTTAAGCC TATGCTTCGT TATTTGTTTT AGCTAAGTAT AATTTCACTC TTGTCTAAGG TAGTTTCTTA AAACAATAAA TACCATGAAT TAGCTCATAT TATCTGGTAA ATTCTCAAAA GTGATTGTCA CGGA
Length1314
Protein Sequence
Protein Residue
Map Locationscaffold_2: 7261380.. 7263245
Download Sequence
A.thaliana
AGI-codeAT1G64970.1
Descriptiongamma-tocopherol methyltransferase
TAIR curator summarygamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves
Alias[G-TMT][TMT1][VTE4][gamma-tocopherol methyltransferase][VITAMIN E DEFICIENT 4]
Gene coexpression
MR
MR Locus Description
6 Ahg942960 VIRB2-interacting protein 2
8.544 Ahg949926 CLP protease regulatory subunit X
15.4919 Ahg481644 nitrilase-like protein 1
17.8885 Ahg483599 casein kinase II beta subunit 4
18.9209 Ahg903921 SERINE CARBOXYPEPTIDASE-LIKE 49
19.8997 Ahg937567 aldehyde dehydrogenase 10A9
23.3666 Ahg475241 U2 snRNP auxilliary factor, large subunit, splicing factor
23.5797 Ahg487407 NAD(P)-binding Rossmann-fold superfamily protein
30.4631 Ahg487142 Pyridine nucleotide-disulphide oxidoreductase family protein
30.5123 Ahg901830 hydroxyproline-rich glycoprotein family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression