Detail



ID : Ahg903921

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|903921|Al_scaffold_0003_1049
Sequence
ATGGAGAAAC TAACTTTTCT CAGCCTTCTT TTGCATTTCG TCGTCTTCAT CGCTTCAACG TTTCCGTCTT CATCGTTTCT CTTGAACGAT CGCACCTTCG AGCGATCAAA CTTGCCGTCG ACGCGCGCGG AGAAGCTGAT CCGGGAGCTA AACCTTTTCC CGCAGCAGGA TCTGAATGTG ATCGATGTCG CTGATTTGCC TCTCACTGCC GCGGAGAGAT CGGGGATTGT TGAACGGAAG TTCGTATTCC CGAATATACT TGCCGATAAT GGTGGCGCAA CTGTCGAAGA TTTAGGTCAT CATGCTGGTT ATTACAAGCT CCCAAAATCT CGTGGCGCAA GGTTTATATC TAACTCTAGA TTTTGGTTTA TGCATCTGTA CATTTGTGTT CGCGAAGATT CAGCATCTGA TTTGTTATGC ATGTTCTACT TCTTCTTCGA GTCACGCAAC AAGAAGGATG CTCCTGTTGT GATTTGGTTG ACGGGAGGGC CTGGATGCAG CAGTGAGTTG GCTATGTTCT ATGAGAACGG TCCTTTCAAG ATCACTAGTA ACATGTCTCT TGCTTGGAAT GAGTATGGAT GGGATCAGGT TTCCAATCTT CTGTATGTTG ATCAGCCTGT TGGAACTGGT TTCAGCTACA CGACAGATAA AAGTGATATC CGTCATGACG AAACTGGAGT TAGCAATGAT CTTTATGATT TTCTGCAGGC TTTCTTTGCA GAGCACCCTA AGTTGGCCAA AAACGACTTT TACATTACTG GAGAGTCATA TGCTGGGCAC TATATTCCGG CTCTTGCTTC CCGAGTCCAT AAAGGAAACA AGGCTAATGA GGGAGTTCAT ATTAACCTAA AGGGATTCGC CATTGGAAAT GGGCTTACAG ATCCTGCACT CCAATACCCA GCCTATCCTG ACTACGCTTT GGAAATGGGT TTAATCACGC AAAAAGAGCA TGATCGTTTA GAAAAGATTG TCCCACTGTG CGAACTATCA ATTAAGCTTT GTGGAACTGA TGGCACAACT TCTTGTTTGG CATCATATCT TGTTTGCAAC TCCTTGTTCA GTGGTGTAAT GAGTCATGCT GGTGGAGTAA ACTATTACGA CATCAGGAAG AAGTGCGTGG GAAGTTTGTG CTACGATTTC TCAAACATGG AGAAATTTTT GAATCTGCAA TCTGTGAGGA AGTCGCTTGG TGTTGGGGAC ATAGACTTTG TCTCCTGCAG TACTTCAGTC TATCAGGCAA TGCTTGTAGA TTGGATGAGG AATCTCGAGG TTGGAATTCC CACACTCTTG GAAGATGGAA TCAGCCTCCT TGTGTATGCT GGAGAATATG ATCTTATCTG CAACTGGCTC GGTAACTCGA GGTGGGTGAA TGCAATGGAG TGGTCAGGGA AAACGAACTT TGGGGCGGCT GAAGAAGTTC CGTTTATTGT GGATGGCAAA GAAGCAGGCT TGTTGAAGAC TTATGAACAA CTCAGTTTCC TCAAGGTGCG AGATGCAGGA CACATGGTTC CAATGGACCA GCCAAAAGCT GCATTGAAAA TGCTGAAGCG ATGGATGGAG AATTCGCTTA TCGAAGATGC TACTGTTACT GTGGCTGCTC AAGGAGGAGA GGAACTGGTT GCTCAGATGT GA 
Length1632
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3910906.. 3913508
Download Sequence
A.thaliana
AGI-codeAT3G10410.1
DescriptionSERINE CARBOXYPEPTIDASE-LIKE 49
TAIR curator summary
Alias[CPY][SCPL49][CARBOXYPEPTIDASE Y][SERINE CARBOXYPEPTIDASE-LIKE 49]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg471340 aspartic proteinase A1
5.47723 Ahg475688 microsomal glutathione s-transferase, putative
6.63325 Ahg476840 eukaryotic translation initiation factor 2 (eIF-2) family protein
8.60233 Ahg491411 nuclear poly(a) polymerase
8.66025 Ahg475836 Rubber elongation factor protein (REF)
8.83176 Ahg485698 ATPase, AAA-type, CDC48 protein
11.1803 Ahg488056 cystatin-1
12.1655 Ahg482251 peroxisomal 3-ketoacyl-CoA thiolase 3
12.3288 Ahg488536 SART-1 family
12.5698 Ahg490342 sucrose synthase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression