Detail



ID : Ahg474072

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474072|fgenesh2_kg.1__4026__AT1G49320.1
Sequence
ATTGAGATCT AAGATCACTT TTAAAAAAAT ATTCTGCTCT CCTTTTTTTA TAAACAAAAA GTCAAAATAT CAAGAAGAGG AAGAAGAAGA AGAAACTCAT TTTCTATGGC TTCTACTTTT AGGCTCTCTA TTAGCTTCCT CACTCTCCTC CTCTTCTCTC TGTGGGTAGT GGAGGCACAC ACGTCAAGAA AGCTGATATC AATCAAGGAA AACGAAGGTC AAGATATTAG TCATTTGCTC AAAGATGGTG AATTCGATGA TCCTTCATTG TACATGTATT TCACACCCAA TGATCTCAAA CTAGGAACCA AATTGCTGAT TTACTTCTAC AAAAACGATC TTCAAAAGCT TCCTCCACTT CTCACAAGAC AACAAGCTGA TCTCATTCCT TTCACTAAGT CAAAGCTTGA CTTCCTTCTC GACCACTTCT CGATCACCAA AGACTCTCCT CAAGGGAAAG CCATAAAGGA GACTCTGGGA CATTGTGATG CTAAAGCTAT TGAAGGAGAG CATAAGTTTT GCGGGACTTC TTTGGAGTCT TTGATCGATC TCGTGAAGAA AACAATGGGG TATAATGTTG ACCTCAAGGT CATGACAACT AGAGTAATGG CACCGGCCCA AAATTCTATA AGCTACGCTT TGCATAACTA TACATTCGTC GAGGCTCCTA AGGAACTTGT CGGTATTAAG ATGTTGGGAT GCCATAGAAT GCTATACCCT TATGCTGTTT ACTATTGCCA CGGACATAAA GGTGGAAGCA GAGTCTTTGA AGTTAATCTG GTGACGGATG ATGGGAGACA ACGGGTTGTA GGACCCGCTG TCTGCCACAT GGACACGTCC ACGTGGGATG CGGATCATGT AGCTTTTAAG GTGTTGAAGA TGGAGCCGAG GTCAGCACCG GTTTGCCATT TCTTCCCTCT TGATAACATT GTGTGGGTAA CAAAGTAAGA AAATAGACTT AGCTCTATAT AATGTGAGTA TGTGTTGTAA TAACTATGGT TTGAAAGATA AAAAAAAAGG AAAAAAAAAA AAAAGAAAGA CAGCCTTAAT GTTGGCTTTG GTATTGCCTC T 
Length1071
Protein Sequence
Protein Residue
Map Locationscaffold_1: 24157755.. 24199033
Download Sequence
A.thaliana
AGI-codeAT1G49320.1
Descriptionunknown seed protein like 1
TAIR curator summaryEncodes USPL1, a BURP domain protein targeted to the protein storage vacuoles. Overexpression of USPL1 affects seed development, protein storage vacuoles and lipid vesicles morphology and function.
Alias[ATUSPL1][USPL1][unknown seed protein like 1]
Gene coexpression
MR
MR Locus Description
8.66025 Ahg475599 photosystem II reaction center protein G
10.8167 Ahg338119 Disease resistance protein (CC-NBS-LRR class) family
17.7764 Ahg481909
26.9815 Ahg488854 sulfate transporter 3;5
36.4143 Ahg478682 multidrug resistance-associated protein 3
36.8239 Ahg496608 Peroxidase superfamily protein
37.4166 Ahg943574 Chitinase family protein
38.7298 Ahg485071 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
41.1704 Ahg476140
51.303 Ahg481314 FAD-dependent oxidoreductase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression