Detail



ID : Ahg476011

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476011|fgenesh2_kg.2__1141__AT1G68840.1
Sequence
GTAACAACGT CACCAAAATC TCTCTCACCT AATTTGTGTT ACTTCTTTCT GTTAAAAGGT TATAATTTGT GTTTCTTGGT TTGGTGAGAA TCTTCAAGAA ACAGAAACAA AAAATGGATT CCAGTTGCAT AGACGAGATA AGTTCCTCCA CTTCAGAATC TTTCTCAGCC ACCGCCACCT TGTCTCTTCC TTCTCATCCG GCTGCGGCGT TACGCCTCTA CCGGATGGGA AGTGGCGGAA GTAGCGTCGT GTTGGATCCC GAGAACGGCC TAGAGACGGA GTCACGAAAG CTACCATCGT CAAAATACAA AGGTGTGGTT CCTCAGCCTA ACGGAAGATG GGGAGCTCAG ATCTACGAGA AACACCAACG AGTATGGCTC GGGACTTTCA ACGAGCAAGA AGAAGCTGCT CGTTCCTACG ACATCGCCGC TCGTAGATTC CGTGGCCGCG ACGCCGTCGT CAACTTCAAG AACGTTCTGG AAGACGGTGA TTTAGCTTTT CTTGAAGCTC ACTCTAAGGC CGAGATCGTG GATATGTTGA GAAAACACAC TTACGCCGAC GAGCTTGAAC AAAACAATAA ACGGCGGTTG TTTCTCTCCG TCGACGTTAA CGGAAAACGT AACGGATCGA GTACAACTCA AAACGAAAAC GTTTTAAAGA CGCGTGAAGT TCTTTTCGAG AAGGCTGTTA CACCTAGCGA CGTCGGGAAG CTAAACCGTC TCGTGATACC TAAACAACAC GCGGAGAAAC ACTTTCCGTT ACCGTCACCG TCACCGGCAG TGACTAAAGG CGTTTTGATC AACTTCGAAG ACGTTAACGG CAAAGTGTGG AGGTTCCGTT ACTCATACTG GAACAGTAGT CAAAGTTACG TGTTGACCAA GGGATGGAGT CGATTCGTCA AGGAGAAGAA TCTCCGAGCC GGTGATGTTG TTACTTTCGA GAGATCGACC GGACTAGACC GGCAGCTTTA TATTGATTGG AAAGTCCGAT CCGGTCCGAG GGAAAACCCG GTTCAGGTGG TGGTTCGGCT TTTCGGAGTT GATATCTTTA ATGTGACTAC CGTGAAGCCA AACGACGTCG TAGCCGTTTG CGGTGGAAAG AGATCTCGAG ATGTTGATGA TATGTTTGCG TTACGGTGTT CCAAGAAGCA GGCGATAATC AATGCTTTGT GACATTTTGT CAAGTTGTGT AGGTTGTGAT TCTTGCTAAG TTGTATTTAG GAAAATAGGA CAAGACCAAA AAATAAACTG AAAAAAATGG TTTTGTGGAA AAGTGGTAAG TAGACCTACC TCATAATAAA ACGTTACCGG ATACAACCTA GATGTGTATC CGTCCCTAAA ACTAGATGAA TCAAATT 
Length1357
Protein Sequence
Protein Residue
Map Locationscaffold_2: 12619057.. 12620475
Download Sequence
A.thaliana
AGI-codeAT1G68840.1
Descriptionrelated to ABI3/VP1 2
TAIR curator summaryRav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE)
Alias[AtRAV2][EDF2][RAP2.8][RAV2][TEM2][ETHYLENE RESPONSE DNA BINDING FACTOR 2][RELATED TO AP2 8][related to ABI3/VP1 2][TEMPRANILLO 2]
Gene coexpression
MR
MR Locus Description
4.58258 Ahg492676
5.47723 Ahg493809
6.78233 Ahg482986 botrytis-induced kinase1
6.9282 Ahg356368 Leucine-rich receptor-like protein kinase family protein
7.81025 Ahg477399 SPFH/Band 7/PHB domain-containing membrane-associated protein family
9.21954 Ahg945307 Aluminium induced protein with YGL and LRDR motifs
10.0995 Ahg496048
14.6969 Ahg493050 WRKY DNA-binding protein 28
19.5959 Ahg928623 exocyst subunit exo70 family protein H4
20.2237 Ahg493283
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression