Detail



ID : Ahg476611

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476611|fgenesh2_kg.2__1741__AT1G74740.1
Sequence
AATTTTACGA AAAGGTCGAA ACTTTCTTCA GCTAAACCCG TGTTTCCTTC CTCTTCTCTG CAACTCACCG GTTCGCCGGA AAAACTTCTT CAAATTACCC TCTTCATTAT CTTCTGCTGA GTTCAAAACT CAGCCATGGG TAATTGCATC GCCTGCGTCA AGTTTGACCC AGAAAACTCA AAACCAAACC AGAAGAAGAA GACTCCACGA CCACGGAAAC CAAACTTCTA CGAAGATCCC GATGGTTTAA GAACTCACGC ACCGTTACGT GTGATCCCTA TGAGCCATCA ATCTCAGATC AGCGACAAGT ATATCCTCGG ACGAGAACTC GGTCGCGGCG AATTCGGAAT CACCTATCTT TGTACAGACA GAGAGACTCG TGAAGCTTTA GCTTGCAAAT CAATCTCCAA GAGAAAGCTC CGAACCGCCG TCGACGTGGA AGACGTCCGC CGTGAAGTCA CGATCATGTC AACTCTCCCG GAACATCCAA ACGTTGTGAA ACTCAAAGCG ACTTATGAGG ACAACGAGAA CGTGCATCTT GTGATGGAGC TTTGTGAAGG AGGTGAGCTT TTTGATCGGA TTGTTGCGAG AGGACATTAT ACAGAGCGTG CGGCGGCTAC CGTCGCGAGG ACGATCGCGG AGGTTGTGAG GATGTGTCAT GTCAATGGTG TTATGCATAG AGATTTGAAG CCTGAGAATT TCTTGTTTGC TAACAAGAAG GAGAATTCTG CACTTAAGGC TATTGATTTT GGTTTATCTG TGCTCTTTAA ACCTGGGGAG AGGTTTACAG AGATTGTAGG AAGTCCTTAT TATATGGCTC CAGAAGTGTT GAAGAGAAAT TATGGACCAG AGGTTGATGT GTGGAGTGCT GGAGTTATCC TCTACATCTT GCTCTGTGGT GTTCCTCCTT TCTGGGCAGA GACTGAACAA GGTGTGGCTC TTGCAATCTT GAGGGGAGTT CTTGATTTTA AGAGAGATCC TTGGTCGCAG ATATCAGAGA GCGCAAAGAG CCTTGTTAAG CAGATGTTGG AACCTGATGC CACTAAGCGT TTGACTGCTC AGCAAGTTCT TGATCACCCT TGGATACAAA ATGCTAAGAA AGCTCCAAAT GTTCCTTTAG GGGATATTGT TAGGTCAAGA TTGAAGCAAT TCTCCATGAT GAATAGATTG AAAAAGAAAG CTCTGCGTGT TATCGCGGAA CACTTGTCTC TTCAAGAAGT TGAAGTGATC AGAAACATGT TTACACTGAT GGATGATGAC AACGACGGTA AAATATCATA TCTAGAACTC AGAGCTGGAC TCCGGAAAGT CGGTTCACAA CTGGGTGAAC CAGAGATCAA ATTGTTGATG GAAGTGGCGG ATGTTAACGG AAATGGATGC CTAGACTATG GAGAGTTTGT AGCAGTGATA ATTCACTTGC AGAAGATGGA GAATGATGAG CATTTCAGAC AAGCTTTTAT GTTCTTTGAC AAAGATGGAA GTGGATACAT CGAATCAGAA GAACTACGTG AAGCTTTAAC CGACGAGTTA GGTGAACCAG ACAACAGCGT TATAATCGAT ATAATGCGTG AAGTCGACAC TGACAAGGAC GGACGAATAA ACTACGATGA GTTTGTGGTG ATGATGAAAG CTGGAACTGA TTGGAGAAAG GCATCAAGAC AATACTCAAG AGAGAGGTTT AAAAGCTTAA GCTTGAACTT GATGAAAGAT GGGTCAATGC ATCTACACGA CGCACTCACT GGACAATCTA TTGCAGTTTG ATCTTTACAC TTGTTTATCA CGAAAACAGA AGCAATCTGA TGCTGTTTTT TACACGTTCA AGAAGGGTTT TTTTTCTGGG CTTTTTTCAG ATGTGATTTT GGCTTACTTC ACTTTGCTTC TAGAGATTCT TTTTTTTTTT TGGTTTTGGG GAAGTTGGAA ATTTGTAATT TGTTGGCGTA GTTAGGCTTT TCATTGGAGC ATGAATGTAT TTGTATGTAA TGTTTGTTTA ATTGTTATAA A 
Length2001
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15456036.. 15458703
Download Sequence
A.thaliana
AGI-codeAT1G74740.1
Descriptioncalcium-dependent protein kinase 30
TAIR curator summarymember of Calcium Dependent Protein Kinase
Alias[ATCPK30][CDPK1A][CPK30][CALCIUM-DEPENDENT PROTEIN KINASE 1A][calcium-dependent protein kinase 30]
Gene coexpression
MR
MR Locus Description
9.59166 Ahg347259 U5 small nuclear ribonucleoprotein helicase, putative
21.3073 Ahg480836 H(+)-ATPase 1
35.6651 Ahg473866 Granulin repeat cysteine protease family protein
44.5982 Ahg481200 myb domain protein 70
50.9902 Ahg897242 Protein of unknown function (DUF626)
55.3082 Ahg917381 beta-galactosidase 4
60 Ahg471910 cationic amino acid transporter 8
65.4294 Ahg492857 VACUOLAR SORTING RECEPTOR 7
65.4523 Ahg492175 RING/U-box superfamily protein
67.3944 Ahg932344 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression