Detail


ID : Ahg476731

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476731|fgenesh2_kg.2__1861__AT1G75830.1
Sequence
CTAAAACATA TACACATTGA AAACAACTAA GCATAAAAAG TTAAAAACTA GTCATGGCTA AGTCTGCTAC CATCGTTACC CTTTTTTTCG CTGCTCTTGT TTTCTTTGCT GCTCTTGAAG CGCCAACAAT GGTGGAAGCA CAGAAATTAT GCGAGAGGCC AAGTGGAACA TGGTCAGGAG TTTGCGGAAA CAATAATGCA TGCAAGAATC AGTGCATTAG ACTTGAGAAA GCACGACATG GATCTTGCAA CTATGTCTTC CCAGCTCACA AATGTATCTG CTACTTCCCA TGTTAATCTA CCAAAAACTC TTAGTGCTTA ATTATAAGTG TAATTTTATA AAATAAGTAT GTGTCACTCT ATAAGTGGTA TTATGACATG TACCAGTTAT GTTTATGTTG CTTTGTTATA ATAAGATAAA
Length420
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15931439.. 15931984
Download Sequence
A.thaliana
AGI-codeAT1G75830.1
Descriptionlow-molecular-weight cysteine-rich 67
TAIR curator summaryPredicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.
Alias[LCR67][PDF1.1][low-molecular-weight cysteine-rich 67][PLANT DEFENSIN 1.1]
Gene coexpression
MR
MR Locus Description
2 Ahg490313 glutathione S-transferase PHI 2
4.89898 Ahg937652 phosphate transporter 3;2
9.38083 Ahg945809
10.9087 Ahg348799 beta-1,3-glucanase 3
12.3693 Ahg474716 dehydrin family protein
15.8745 Ahg488325 formate dehydrogenase
16.6132 Ahg947410 glutamine synthase clone R1
17.7482 Ahg482337 Dormancy/auxin associated family protein
19.2094 Ahg490619 FAD/NAD(P)-binding oxidoreductase family protein
19.7484 Ahg334804 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression