| Annotation |
|---|
| Description | jgi|Araly1|476877|fgenesh2_kg.2__2007__AT1G77140.1 |
| Sequence |
GAATTTTACG GCGGAACGAT GGTTTTGGTT ACGTCTGTGC GTGATTACAT CAACCGGATG CTTCAGGATA TCTCCGGCAT GAAGGTTCTC ATACTCGACT CCGAAACGGT TAGCAATGTA AGCATTGTGT ATTCACAGTC AGAGCTGCTT CAGAAAGAAG TTTTTCTTGT GGAGATGATA GATTCAATCT CTGTGTCAAA AGAATCGATG TCGCATCTGA AAGCTGTTTA TTTCATCCGT CCAACTTCAG AGAATATTCA GAAACTACGT TACCAGCTTG CCAATCCTAG ATTTGGAGAG TACCATTTAT TTTTCTCCAA TCTGTTAAAG GATACTCAGA TTCATATTTT GGCTGATTCC GACGAGCATG AGGTTGTACA GCAAGTTCAG GAGTATTATG CAGACTTTGT TGCTGGTGAT CCATATCATT TCACATTGAA TATGGCATCA AACCACCTTT ATATGATCCC AGCAGTTGTC GATCCCTCTG GTTTGCAACG CTTCTCCGAT CGGGTTGTTG ATGGAATTGC GGCAGTGTTT CTGGCGTTGA AACGGAGACC TGTCATCAGA TATCAGAGGA CTTCTGATAC TGCGAAAAGG ATTGCACAGG AAACAGCTAA ATTGATGTAT CAGCATGAAA GCGCTCTTTT TGACTTTAGA CGGACTGAAA GCTCTCCGTT GCTACTTGTA ATTGACAGAA GAGATGACCC GGTTACCCCA TTGCTGAATC AGTGGACATA TCAGGCAATG GTGCACGAAC TCATAGGACT TCAAGATAAT AAAGTGGACT TGAAATCCAT TGGAAGTCTT CCAAAAGATC AGCAAGTGGA GGTGGTTTTA TCATCAGAAC AAGATGCATT TTTCAAATCT AACATGTATG AAAATTTTGG GGATATTGGA ATGAACATCA AGCGAATGGT AGATGACTTT CAGCAGGTGG CCAAGAGTAA CCAAAATATC CAGACAGTAG AGGATATGGC CAGATTTGTT GACAACTACC CTGAGTACAA AAAGATGCAA GGCAACGTTT CAAAGCATGT AACTCTGGTT ACTGAAATGA GCAAGCTAGT TGAAGCAAGG AAACTGATGC TGGTTTCACA AACAGAGCAG GACTTGGCTT GCAATGGTGG CCAAGGAGCT GCATATGAGG CAGTTATGGA TCTCTTAAAT AATGAAAGTG TTTCTGACAT CGACCGGCTG CGTTTGGTAA TGCTATATGC TTTGCGCTAT GAGAAAGAAA ACCCCGTTCA GTTGATGCAA CTGTTCAACA AATTGGCTTC ACGGTCTCCC AAGTACAAAC CAGGGTTAGT TCAGTTTCTC TTGAAACAAG CCGGTGTGGA GAAGCGTACT GGGGATCTAT TTGGAAACAG AGATCTTTTG AATATAGCAC GAAACATGGC TCGTGGACTT AAGGGGGTTG AGAATGTGTA CACTCAACAT CAGCCTCTTC TGTTTCAAAC AATGGAGAGC ATAACCAGAG GGAGATTACG AGATGTGGAC TACCCATTTG TTGGAGATCA TTTTCAACAG GGACGGCCAC AAGAGGTGGT TATTTTTATG GTTGGTGGAA CAACATACGA GGAATCACGC TCTGTTGCTC TACAGAATGC CACCAACTCC GGGATTCGGT TTATTCTCGG CGGCACCGCA GTGCTTAATT CCAAGAGATT TCTAAAGGAC TTGGAAGAAG CACAAAGGAT ATCAAGATCA GGTAGCCATA TGGTGTGAAT GTAAATTATT AAGTCTTAAG ATTCTTCCGT ATGAAATGGA GAGCATAGAA GAAAGAGACA AATGAAAGAA AGAAGATTGT GGTCAGGTTT ATCGAATCTT TCGTATACAT TGATGATTAC CCCCACTAGA GAGATGTAAT TTTTGGGGTT TGTGTGTGTA TTCATCGTGG TACAGTTTAA TTGGACCGTT ATGGCTAATC AAGAAATGTA AAACTTGAGG AAATTTTACT |
| Length | 1960 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 16510897.. 16514753 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G77140.1 |
| Description | vacuolar protein sorting 45 |
| TAIR curator summary | A peripheral membrane protein that associates with microsomal membranes, likely to function in the transport of proteins to the vacuole. It is a member of Sec1p protein family. It may be involved in the regulation of vesicle fusion reactions through interaction with t-SNAREs at the Golgi trans face. |
| Alias | [ATVPS45][BEN2][VPS45][bfa-visualized endocytic trafficking defective 2][vacuolar protein sorting 45] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10 |
Ahg897921 | centrin2 |
| 15.6844 |
Ahg928923 | conserved peptide upstream open reading frame 20 |
| 35.8887 |
Ahg950284 | WRKY DNA-binding protein 2 |
| 36.6606 |
Ahg497414 | GPI transamidase component PIG-S-related |
| 37.3765 |
Ahg484067 | phytanoyl-CoA dioxygenase (PhyH) family protein |
| 40.4969 |
Ahg328661 | Class I glutamine amidotransferase-like superfamily protein |
| 42.5441 |
Ahg915049 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 45.5192 |
Ahg933561 | WRKY DNA-binding protein 21 |
| 46.2601 |
Ahg929279 | Galactosyltransferase family protein |
| 48.3322 |
Ahg487088 | RING/U-box superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|