Detail


ID : Ahg484067

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484067|fgenesh2_kg.5__59__AT2G01490.1
Sequence
ATCAATTTCC CGGCGAAATC TCTACCGGAA CCACCGCGTT ATGGGAATCA CCGGAAGTCT AACTCCAGAT CAGCTCCAGT TTTTTCACTC TCAAGGGTAT TTGGTAATCG AATCGTTCGC GAATGAGGAT GAGATTAGAG GCTTAAGGAA GAGGATGGAC GAGTTGCTTA ATCAGTTTGA TTGTTCCGTC TCGTCCTCTA TCTTCTCCAC TAAGAATCAG AAGCACACCA CCGATAATTA CTTCTTTGAG AGCGCTCAGA AAATCTCCTT CTTCTTTGAA GAAAAAGCTT TTGCTGATGA TGGGAAATTG AAGCAACCCA AAGAACTCTC TATAAACAAA GTTGGGCATG CACTGCATGA GCTTGACCCA TTGTATAAGG AATTCACATA TTCGTCCAAG TTTTCAAGTT TGGTGTCATC CTTAGGTTAC AAGAGACCAG TAGTCATGCA GTCTATGTAC ATTTTCAAGC AACCTGGAAT TGGAGGCGAA GTTGTGCCGC ACCAAGATAA TTCTTTTGTG TACACGGATC CACAGAGTTG TACTGGTCTC TGGATTGCTC TGGAAGATTC TACAACAGTT AATGGTTGTC TTTGGGCAAT TCCTGGATCT CATAAGAATG GTTTAGTTAG AAGGTTTATC CGGGGGGAAA ACGGTGTAAC CTTTGATCAG CCATCCCCAT CCTACGAGCA GAAAGATTTC GTGTCTATTG AAATGAAAGC AGGCTCATTG ATTGCCATTC ATGGTGATCT AATCCATCAA AGTTTCGAGA ATCTATCCTT GAAGTCAAGA CATGCCTATA GCTTACATGT AGTAGAATCT GATGGATGTA AGTGGGCAAA AGACAACTGG ATACAAAGAG AAAAAATGCC GGAGCCTCTC TATGTTCTTC CTTGATTCAC ACCAGTCGTG GGAAAACACT GTGAGTTACT GTTTATCAAA TTTCTTTTAT GATGATCTAC CCACTATCTT TGTGAGAACT TTGAACAGTA ATAAGAACAT GGCTAAAAGG GCCTTCTTGT GTCATTTACT TGTTGAATAC AATTTGTTTA TGCTTGGTCT CTGTAGTTGT CTTTAGATAA CCAAACTCAG TGGTCAATAA AGTGTGACAG TGATTACTTG ATGTTTCTTT G
Length1131
Protein Sequence
Protein Residue
Map Locationscaffold_5: 244707.. 247216
Download Sequence
A.thaliana
AGI-codeAT2G01490.1
Descriptionphytanoyl-CoA dioxygenase (PhyH) family protein
TAIR curator summary
Alias[PAHX][phytanoyl-CoA 2-hydroxylase]
Gene coexpression
MR
MR Locus Description
6.85565 Ahg350108
8.60233 Ahg488550 Target of Myb protein 1
9.79796 Ahg331952 Protein kinase superfamily protein
13.4164 Ahg486060 alpha-soluble NSF attachment protein 2
14.0712 Ahg934405 conserved peptide upstream open reading frame 52
15.906 Ahg947365 PRP38 family protein
19.4422 Ahg488313 Protein kinase superfamily protein
26.9444 Ahg912745 NADH-ubiquinone dehydrogenase, mitochondrial, putative
32.0312 Ahg938953 farnesyltransferase A
33.2716 Ahg943609 MAP kinase 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression