| Annotation |
|---|
| Description | jgi|Araly1|928923|scaffold_301380.1 |
| Sequence |
TTAGCTTCAG CAATGCAGGC ATGAAAGAAA AGAATTCCAC CACCGCCTCT ACACTTGGAC GGATTTTAGC TACTTGTTCT AAACAGGCCA AAGACTACGG GAGCTGTGTT GCATCTAAAG TCCATGAGGT TGAAAGAGAC ATATGTTTGA AAGAGTTTCT TGCACTGAAG AGTTGTATGC AGCATACGGC AAGTGTTGGT TCTGGTGCTT TATCACATGT GTATATACAT CATCCAGCCC TACGTTGCAA TATTCCTGAA TCCAGGGGGT TGTTCTATGA TGATGCCAAC AGATTGCTGA TATGTACCAC ATCTAGTCAG GTCTTTTCAT GGGAAACATC CCCCTTTAAT CCAGACGTAC CTCCCTCAGT TGATTCTATA AATGAAGGGC CTATTCTGTC AATCAGATTT TCTCTTGATA AAAAAGCGAT AGCTGTCCAA AGATCTGATT GTGAAGTACA GTTGTTTAAT CGAGAGACCA AGAAGATACT AAACCACAGA TGTAAGGCAG GATCAGAGAG CATTCTCGGA TTCTTTTGGA GTGACTCTCC ATTATGTGAT CTTGCAATTG TAAAGACCAG TGGCATGGAC TTGTTCGCTT GTGATTCTAT GTTGAATTCA CTACGTTTGG TGGAAACCAA AAAGGCGAAT GTTAATTGGT ACACCTATAC ACATGAAACT CGATTGGTTC TTCTTGCATC AGGATTGCAA TGCAAGACAT TTAATGGATT TCAGCTTTCC ACTGCAGGAG TTGTTCGTTT ACCGAGATTT GAGATGACCA TGGCTAGATC TGAATCAAAC AGTAAACCTA TTCTCTCTGC TGGAGATCTC CACTTAGTCA CTGTCTATGG CCGAATATAT TGCTTACAAG TGGACAGGGA GGCAATGCTA CTGCATCTAT ACAGGTTTTA CCGAGATGCA GTTGTTCATC AAGGTTCTTT ACCAATATAC TCAAGCAAAT TGTCGGTGAA TGTGGTCGAT AATTTATTGC TTGTGCACCA AATCGATGCA AAGGTTGTCA TCATCTACGA CTTATTTGTG GATTCTCGAG CTCCTGTATC TGCGCCTCTT CCTTTGCTGT GGAGGGGTTA CCAAGGCTCT GACACATCGT CTCAAGCTGC TAACAAAGAA ATTGAGAGCT CAGAATCATC TACAAGCAAT GAAAACATAG TCATGTATGA AGATGGCTGG ACCTTTCTTG TTCCAGATCT TATTCTGGAT GAGACTAACA AAGTTTTATG GAAGATACAT TTGGATCTTG AGGCAATTTC CGCTAGCAGC TCAGACAGGA CGTCTCTTCT AGAATTCCTG CAGCGAAGGA AGTTGGAAGC AAATAAGGCC AAACAATTGT GCTTGGGGAT AGCAAGGGCT ACTATTTTGG AACGTCGACC AGCAACCCAG GTAACTCAGG CAATCGATGT ACTAGTCACA GCATATTCCT ACTCGGTTAA AGCCGGTACA TACAAGGAAA TAAAGAACGA AAAGGCCACT GCATCTACTC CAACCGCTGG TGCATCTCCT GATAACGAAA GACATAGGCC GTCTGGAAGC AATATTGATG AAGATGTTGA AATGAACCTA TCATCTGGTT CAAAGGAGAA CATGTTTTGT GCTGATGAGC AGCAAGAATC TCAACTTTCG TCACCGGCAG TTTCACCGGA TGAGCTCTAC AAGTTTGTAT TTGCTTCTGT GGAGGAAATG ATGGTTGAGG AATCAGAGTA CCTAGTTGCT ATCATCACCG AGTTCCTTCG CAGTATAAGT GCAGAAAAAC TCAAAGTGGA TCTGAACATC TATGTGATGA CCATCAGACT TTTAGCTTAC AGTAAGCGAT TTGCAGAACT GTCGCTATTC ACCACAAACA AGATAATCGA ACCCTCAAAG GAAGTTGCGT TCCAACTTCT CGAGAGTGGT CGCCAAAACC AAAATATCAG GGTAAGGAAA CTTGGGCTTG ATATGTTGAG ACAACTCTCC TTGCACCATG ATTACATCTC CTCCCTTGTG CAAGATGGAT ACTACCTTGA AGCTCTGCGA TATGCTCAGA AGCATAAGGT GACGAGTGTG CGATCGTCGC TGTTCCTAGA AGCAGCATTC GCGTCGAATG ATCTGCAGCA TTTGGCTGCA ATTTTGAGGG TCTTGTCGGA ATTGATTCCT GGGTTTAAAG AAACTTCTGA ATATTACACT TTCTATGGCC TTCTCAATGA CACCAGTTCC TCAGTTGCTG TCTGAAGAGA ATCAATCTGT TACCA |
| Length | 2245 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 4579977.. 4584853 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G12012.1 |
| Description | conserved peptide upstream open reading frame 20 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF20 represents a conserved upstream opening reading frame relative to major ORF AT3G12010.1 |
| Alias | [CPuORF20][conserved peptide upstream open reading frame 20] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.56776 |
Ahg947489 | Lung seven transmembrane receptor family protein |
| 7.87401 |
Ahg486455 | Ankyrin repeat family protein |
| 9.94987 |
Ahg479415 | AP2/B3-like transcriptional factor family protein |
| 10.6771 |
Ahg328749 | prenylated RAB acceptor 1.C |
| 11.225 |
Ahg496995 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 11.9164 |
Ahg333714 | |
| 12.49 |
Ahg316317 | UDP-Glycosyltransferase superfamily protein |
| 15.6525 |
Ahg314839 | ARM repeat superfamily protein |
| 15.6844 |
Ahg476877 | vacuolar protein sorting 45 |
| 16.4924 |
Ahg495780 | CwfJ-like family protein / zinc finger (CCCH-type) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|