Detail



ID : Ahg477170

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477170|fgenesh2_kg.2__2300__AT1G80760.1
Sequence
CAACCAAATA TCAATCATCT ATTTTAGGTC CTTACTCATA AGTCAACTCT CATGTCTTCC TCTATAAATA CCCTACTAAA AACAATCATA GCAAAAACAT ATATCCTCAA ATTAAGATCT CATCTCTCTC TCTCTAGCCT CGATATGGAT CATGAGGAAA TTCCATCAAT GCCCTCAACG CCGGCTACAA CCCCGGGGAC ACCAGGAGCA CCGCTCTTTG GAGGATTCGA AGGGAAGAGG AATGGACACA ATGGTAAATA CACACCAAAG TCACTTCTAA AAAGCTGCAA ATGTTTCAGT GTTGACAATG AATGGGCTCT TGAAGATGGA AGACTCCCTC CGGTCTCTTG CTCTCTCCCT CCCCCTAATG TCTCCCTCTA CCGCAAGTTG GGAGCAGAGT TTGTTGGGAC ATTGATCCTA ATATTCGCTG GAACAGCGAC GGCGATCGTG AACCAGAAGA CAGATGGAGC TGAGACGCTT ATTGGTTGCG CCGCGTCGGC TGGTTTGGCG GTTATGATCG TTATTTTATC GACTGGTCAC ATATCCGGGG CGCATCTCAA TCCGGCTGTC ACTATTGCCT TTGCTGCTCT CAAACACTTC CCTTGGAAAC ACGTGCCGGT GTACATCGGA GCTCAGGTGA TGGCCTCCGT GTGTGCGGCG TTTGCACTGA AAGCAGTGTT TGAACCAACG ATGAGCGGTG GCGTGACGGT GCCGACGGTG GGTCTAAGCC AAGCCTTTGC CTTGGAGTTC ATTATCAGCT TCAACCTCAT GTTCGTTGTC ACAGCCGTAG CCACCGACAC GAGAGCTGTG GGAGAGTTGG CGGGAATTGC GGTAGGAGCA ACGGTCATGC TTAACATACT CATAGCTGGA CCAGCAACTT CTGCTTCGAT GAATCCTGTA AGAACACTAG GTCCAGCCAT TGCAGCAAAC AATTACAGAG CTATTTGGGT TTACCTCACT GCCCCGATTC TTGGCGCGTT AATCGGAGCA GGAACATACA CGATTGTGAA GTTGCCAGAG GAAGATGAAG CACCCAAAGA GAGGAGGAGC TTCAGAAGAT GAAAGACAAT GTGTATAATA TAATATCTG 
Length1089
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17819682.. 17821296
Download Sequence
A.thaliana
AGI-codeAT1G80760.1
DescriptionNOD26-like intrinsic protein 6;1
TAIR curator summaryEncodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.
Alias[NIP6][NIP6;1][NLM7][NOD26-like intrinsic protein 6;1]
Gene coexpression
MR
MR Locus Description
7 Ahg495421
9.16515 Ahg482707 plasma membrane intrinsic protein 2
16.4317 Ahg485547 sulfate transporter 3;1
18.4391 Ahg496002 Undecaprenyl pyrophosphate synthetase family protein
19.0526 Ahg943195 fibrillin
22.383 Ahg488074 Calcium-dependent lipid-binding (CaLB domain) family protein
22.9783 Ahg481023
24.8998 Ahg494620 RmlC-like cupins superfamily protein
31.1769 Ahg475155 Sulfite exporter TauE/SafE family protein
32.7109 Ahg894303 FAD/NAD(P)-binding oxidoreductase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression