Detail



ID : Ahg477458

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477458|fgenesh2_kg.3__159__AT3G02230.1
Sequence
CCATCACCTC CGATCTCAAA TCTCACATAT TTCTCTCCAA TTCTCTTCTC TCTGAATCAA TCAATCATGG TTGAGCCGGC GAATACCGTT GGAATTCCGG TGAATCACAT TCCATTGTTG AAGGATGAGC TCGATATCGT GATCCCCACG ATCCGTAACC TCGATTTCCT GGAGATGTGG AGGCCTTTTC TTCAGCCTTA CCATCTGATT ATCGTCCAAG ATGGAGATCC ATCGAAGACC ATTGCTGTCC CTGAAGGGTT CGATTACGAA CTCTACAACA GGAACGACAT CAACCGTATC CTTGGTCCTA AAGCTTCCTG CATTTCCTTC AAGGACTCTG CTTGTCGTTG CTTCGGCTAC ATGGTCTCCA AGAAGAAGTA CATCTTCACT ATTGACGACG ATTGCTTCGT TGCCAAGGAT CCATCTGGAA AAGCTGTGAA CGCTCTTGAG CAACACATCA AGAACCTTCT CTGCCCATCA ACTCCATTTT TCTTCAACAC CTTGTACGAC CCATACCGTG AAGGTGCTGA CTTCGTCCGT GGATACCCTT TCAGTCTCCG TGAGGGTGTT TCCACCGCTG TTTCTCACGG TCTGTGGCTC AACATCCCTG ATTACGATGC CCCTACCCAA CTTGTGAAGC CTAAGGAAAG GAACACAAGG TATGTGGATG CTGTCATGAC CATCCCAAAG GGAACACTCT TCCCTATGTG TGGCATGAAC TTGGCCTTTG ACCGTGAGCT CATTGGTCCG GCTATGTACT TTGGTCTCAT GGGTGATGGT CAGCCTATTG GTCGCTACGA CGATATGTGG GCTGGATGGT GTATCAAGGT GATCTGTGAC CATTTGGGAT TGGGAGTGAA GACAGGTTTG CCCTACATTT ACCACAGCAA AGCCAGTAAC CCGTTTGTGA ACTTGAAGAA GGAGTACAAG GGAATCTTCT GGCAGGAGGA TATCATTCCT TTCTTCCAGA GCGCAAAGCT CACGAAAGAA GCTGTGACAG TTCAACAATG CTACATGGAG CTGTCCAAGT TGGTGAAGGA GAAGCTAAGC CCCATTGATC CTTACTTTGA CAAGCTTGCA GACGCTATGG TCACCTGGAT TGAAGCTTGG GATGAGCTTA ACCCACCCAC TAAAGCTTGA GCAGCAAAAA AACCACCACC GCAGTTTTGG TTATTAGCTC AATCTATCAT CTATCTTCTC TGTTTTGTTT TTGTTTTATC TTTTCTCAAT TTTCCGGCGA TTATTCAGTT CGTTTTTAAG TCGCTGGAGT TTATTCAAAT AGTGATGGTG TAGTTCTATT TATGACCGAG ACAATCTCTC CTTTGAGGTT TTTCGTTTTT GTTTCAATAA TAAAATCATA TATCCCTTAG TCTTTGGTGT C 
Length1381
Protein Sequence
Protein Residue
Map Locationscaffold_3: 469725.. 471875
Download Sequence
A.thaliana
AGI-codeAT3G02230.1
Descriptionreversibly glycosylated polypeptide 1
TAIR curator summaryreversibly glycosylated polypeptide possibly involved in plant cell wall synthesis
Alias[ATRGP1][RGP1][ARABIDOPSIS THALIANA REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1][reversibly glycosylated polypeptide 1]
Gene coexpression
MR
MR Locus Description
5.2915 Ahg940287 serine carboxypeptidase-like 35
9 Ahg478235 Ribosomal protein L10 family protein
9.32738 Ahg940872 translocon-associated protein beta (TRAPB) family protein
14.5945 Ahg478067 2Fe-2S ferredoxin-like superfamily protein
15.4919 Ahg478157 ADP/ATP carrier 1
15.9374 Ahg496177 GTP binding Elongation factor Tu family protein
16.6132 Ahg482640 ribosomal protein L24
23.0217 Ahg904413 phosphoesterase
23.4947 Ahg481907 fatty acid desaturase 3
24.8193 Ahg322471 Ribosomal protein L30/L7 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression