Detail



ID : Ahg481907

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481907|fgenesh2_kg.4__967__AT2G29980.1
Sequence
CATCAAACCC TTTCTTCACC ACATTTCTCT CTCTTCTCTC TTTCTATCTC TCTTTCTCCG GCGATGGTTG TTGCTATGGA CCAACGCACG AATGTGAACG GAGATTCCGG CGCCGGAGAC CGGAAGAAAG AAGAAAGGTT TGATCCGAGT GCACAACCAC CGTTTAAGAT CGGAGATATA AGGGCGGCGA TTCCTAAGCA CTGTTGGGTA AAGAGTCCTT TGAGATCAAT GAGTTACGTC GTCAGAGACA TTATCGCCGT CGCGGCTTTG GCCATCGCCG CCGTGTATTT TGATAGCTGG ATCCTTTGGC CTCTTTATTG GGCCGCACAA GGAACACTTT TCTGGGCCAT CTTCGTTCTC GGCCACGACT GTGGACATGG GAGTTTCTCA GACATTCCTC TGCTGAATAG TGTGGTTGGT CACATTCTTC ATTCTTTCAT CCTCGTTCCT TACCATGGTT GGAGAATAAG CCACCGGACA CACCACCAGA ACCATGGCCA TGTTGAAAAC GACGAGTCAT GGGTTCCGTT GCCAGAAAGG GTGTACAAGA AATTGCCCCA CAGTACTCGG ATGCTAAGAT ACACTGTCCC TCTCCCCATG CTTGCTTATC CTCTCTATTT GTGCTACAGA AGTCCTGGAA AAGAAGGATC ACATTTTAAC CCATACAGTA GTTTATTTGC TCCAAGCGAG AGAAAGCTTA TTGCAACTTC AACTACTTGT TGGTCCATAA TGTTTGTCAC TCTTATCGCT CTATCATTCA TCTTCGGTCC ACTCGCGGTT CTCAAAGTAT ACGGTGTACC GTACATCATC TTTGTGATGT GGTTGGACGC TGTCACGTAT TTACATCACC ATGGTCACGA TGAGAAGTTG CCTTGGTATA GAGGCAAGGA ATGGAGTTAT CTACGTGGAG GATTAACAAC AATTGATAGA GATTACGGAA TCTTCAACAA CATTCATCAC GACATTGGAA CTCACGTGAT CCATCATCTC TTCCCACAAA TCCCTCACTA TCACTTGGTC GATGCCACGA AAGCAGCTAA ACATGTGTTG GGAAGATACT ACAGAGAACC AAAGACGTCA GGAGCAATAC CAATCCACTT GGTGGAGAGT TTGGTCGCAA GTATTAAGAA AGATCATTAC GTCAGTGACA CTGGTGATAT TGTCTTCTAC GAGACAGATC CAGATCTCTA CGTTTACGCT TCTGACAAAT CTAAAATCAA TTAATCTCTT CCTTTTTCAT TTGTTTAGCT CTATTAGGAA TAAACTAGCC CTCTTTTTTT TTTTGTCTTG TTGTTTTTAA GTTAAAAGTG TTCTCGTGAA ACTCTCTCTT TTTTTTTTTA TAATGTATTT ACATTACAAG ACGTAAAGTT TTGTTCCTTT TCTTTTCTTT TTTTAGTTAC CATCAAAAAG ATTTC 
Length1415
Protein Sequence
Protein Residue
Map Locationscaffold_4: 13205129.. 13208760
Download Sequence
A.thaliana
AGI-codeAT2G29980.1
Descriptionfatty acid desaturase 3
TAIR curator summaryEndoplasmic reticulum enzyme responsible for the synthesis of 18:3 fatty acids from phospholipids. Uses cytochrome b5 as electron donor.
Alias[AtFAD3][FAD3][fatty acid desaturase 3]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg930186 cell wall-plasma membrane linker protein
8.48528 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
11.8322 Ahg482567 NDR1/HIN1-like 12
13.4164 Ahg938360 Eukaryotic aspartyl protease family protein
22.3607 Ahg485617 Eukaryotic aspartyl protease family protein
22.6936 Ahg472226 tubulin beta-5 chain
23.4947 Ahg477458 reversibly glycosylated polypeptide 1
29.6479 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
31.4484 Ahg485907 Pectin lyase-like superfamily protein
34.176 Ahg487289 translocon at the outer envelope membrane of chloroplasts 34
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression