Detail



ID : Ahg477487

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477487|fgenesh2_kg.3__188__AT3G02530.1
Sequence
AGAGAGAAGC TCCCAGAGAA GAAAAGCCAG TTTCTTTCGA TCTCTCATCA TCGAAAATGT CTGTGCGTGT TCTGAATCCT AATGCGGAGG TGCTCAACAA ATCGGCCGCG CTTCATATGA CCATCAACGC CGCCAAGGGT TTACAGGATG TACTCAAGTC GAATCTCGGT CCTAAGGGAA CTATTAAGAT GCTTGTTGGT GGTTCCGGGG ATATCAAGCT TACCAAGGAT GGCAACACGC TTTTGAAGGA AATGCAAATT CAAAATCCAA CAGCCATCAT GATTGCCAGG ACAGCTGTTG CTCAGGATGA CATAAGTGGT GATGGTACTA CTTCCACTGT CATCTTCATT GGTGAGCTTA TGAAGCAGTC GGAGCGTTGC ATCGATGAAG GAATGCATCC ACGAGTCTTA GTTGATGGTT TCGAGATTGC AAAAAGAGCT ACTCTCCAAT TTCTCGACAC TTTCAAGACA CCTGTGGTTA TGGGTGATGA GCCTGACAAA GAGATCCTGA AAATGGTTGC CAGGACAACG CTAAGAACTA AGCTGTATGA AGGCTTAGCT GATCAACTGA CTGATATTGT TGTTAATTCG GTTCTCTGCA TTCGGAAGCC TGAGGAACCT ATTGATCTGT TTATGGTTGA GATTATGCAC ATGCGCCATA AATTTGATGT TGACACACGA TTGGTTGAGG GGCTTGTTCT TGATCATGGT TCAAGACACC CTGACATGAA GCGACGTGCG GAGAATTGTC ACATCCTGAC TTGCAATGTG TCATTAGAGT ATGAGAAGAG TGAAATTAAT GCAGGATTCT TCTACTCGAA TGCGGAGCAG AGGGAAGCCA TGGTTACTGC TGAGCGACGT TCTGTTGATG AAAGAGTTCA GAAAATTATT GAGCTGAAGA ACAAGGTTTG TGCTGGTAAT GATAACAGCT TTGTTGTCCT AAATCAAAAG GGTATTGATC CCCCGTCATT GGATCTTCTT GCTAGAGAAG GGATAATCGC CCTTAGAAGA GCAAAGAGGA GGAACATGGA ACGTTTGGTT TTGGCATGTG GTGGAGAAGC TGTGAACTCT GTTGATGACT TGACCCCTGA TTCTCTTGGT TGGGCTGGAC TTGTATATGA GCACGTTCTT GGAGAGGAGA AGTACACATT TGTCGAGCAA GTGAAGAATC CTCATTCATG TACTATCCTC ATAAAAGGCC CTAACGACCA CACTATTGCT CAAATTAAGG ACGCTGTCCG TGATGGTTTA AGATCAGTTA AGAATACCCT AGAAGATGAG TGTGTCGTAT TAGGAGCTGG AGCTTTTGAA GTTGCAGCAA GACAACACTT AATCAATGAA GTCAAGAAAA CCGTTCAAGG GCGCGCTCAA CTCGGTGTTG AAGCTTTTGC TAATGCCCTT CTCGTGGTGC CTAAGACACT TGCTGAAAAT GCTGGGCTTG ACACTCAAGA CGTTATCATT TCTCTAACGA GTGAGCATGA CAAAGGAAAC GTCGTGGGAC TAAACCTACA GGATGGAGAA CCAGTCGACC CTCAGCTTGC CGGTATTTTC GACAATTACT CGGTGAAACG CCAACTTATC AATTCAGGGC CGGTGATTGC TTCGCAGTTG CTATTAGTGG ATGAAGTGAT TCGTGCAGGA AGAAATATGA GGAAGCCTAC TTAACTTTTC CTTTCGTGTT TTGAGCATTA GCATATGAAT TTTATTTCAA TTTTACTTGT TATCTTTTTG TTGTCATAGA TAATTTTGAA TGTATC 
Length1756
Protein Sequence
Protein Residue
Map Locationscaffold_3: 612285.. 616178
Download Sequence
A.thaliana
AGI-codeAT3G02530.1
DescriptionTCP-1/cpn60 chaperonin family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg951336 cyclin dependent kinase group C2
4.79583 Ahg478733 evolutionarily conserved C-terminal region 2
7.2111 Ahg913002 DEA(D/H)-box RNA helicase family protein
7.34847 Ahg473690 PDI-like 5-2
7.4162 Ahg489218 XS domain-containing protein / XS zinc finger domain-containing protein-related
8.3666 Ahg919663 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein
11.7473 Ahg322676 nonsense-mediated mRNA decay NMD3 family protein
12 Ahg481580 20S proteasome alpha subunit G1
13.0384 Ahg359344
13.7477 Ahg487826
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression