Detail



ID : Ahg477838

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477838|fgenesh2_kg.3__539__AT3G05490.1
Sequence
GTTGTCTTCA GCTGTGTACA GAATCAAGAA GACTCTGATT CACCGAGAAG GTTTCGCCTT AAAGATGAAC ACTCGCGCGA TCTACGCCGT CATCGCGATC CTGGCGATCG TAATCTCAGC CGTCGAATCA ACCGGCGACT TCGGAGATTC GCTAGATTTC GTGAGAACCG GATCTTCATC GCTCTTCTCT GGATGCACAG GATCGATCGC TGAGTGTATA GCCGAAGAAG AAGAGATGGA GTTCGATTCA GAAATCAGCC GGCGGATATT AGCACAGAAG AAGTACATTA GCTACGGTGC TATGAGGAGG AACAGTGTGC CTTGTTCACG CCGTGGTGCG TCGTACTACA ACTGCCAGCG TGGAGCTCAG GCGAATCCCT ACAGCCGTGG ATGCAGCACC ATTACTAGGT GCAGGCGTTG AAGAAGATGA GTCACTTGAA TTTCCTATTT TGCCCCTTTC TTTTTTCATT TTTTTAATTA TTTTTATTTT CCGGAATATA TGGGTTTGAT TTACACATTT GAAAAACTAC TACTATAGTC TTTGTTTT 
Length548
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1990573.. 1991171
Download Sequence
A.thaliana
AGI-codeAT3G05490.1
Descriptionralf-like 22
TAIR curator summaryMember of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
Alias[RALFL22][ralf-like 22]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg485891 Plant-specific GATA-type zinc finger transcription factor family protein
9.74679 Ahg473657 Phosphate-responsive 1 family protein
18.7617 Ahg471170 xyloglucan:xyloglucosyl transferase 33
22.3607 Ahg314194 SKP1 interacting partner 4
25.2389 Ahg487690 Pentatricopeptide repeat (PPR) superfamily protein
33.1361 Ahg472504 Plant neutral invertase family protein
38.7298 Ahg483577 O-fucosyltransferase family protein
39.1535 Ahg472427 Integrase-type DNA-binding superfamily protein
39.1918 Ahg931262 Leucine-rich repeat (LRR) family protein
39.3446 Ahg926119 Protein phosphatase 2C family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression