Detail



ID : Ahg487690

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487690|fgenesh2_kg.6__824__AT5G08510.1
Sequence
ATGAATCAGA TCAAGCAGCT CCACGCGCAC TGTCTGAGAA CAGGCGTAGA CGAAACCAAA GATCTCTTAC AACGATTGCT TCTGATTCCA AACCTTGTTT ATGCCCGAAA GCTCTTCGAT CTTCATCGAA ACCCTTGTAT CTTCCTCTAC AACAAGCTGA TTCAATCTTA CTCTGTTCAT CATCAGCCCC ATGAATCTAT CGTCCTCTAT AATCTCCTCT CCTTCGATGG CATCCGTCCA AATCACCACA CTTTCAATTT CATTTTCGCA GCTTCTGCTT CGTTTTCGTC AGCTCGGCCT TTACGGTTGC TTCATTCTCA GTTTTTTAGA TCTGGGTTTG AGTCCGATTC CTTCTGCTGC ACTGCTCTAA TCACTGCCTA TGCGAAGCTA GGAGCTTTGT GTTGTGCGCG CAGAGTGTTC GACGAAATGT CTAACCGAGA TGTACCCGTG TGGAATGCAA TGATCACGGG TTACCAAAGA CGAGGTGATA TGAAGGCGGC GATGGAGTTG TTTGACTCAA TGCCTAATAA GAACGTAACC TCGTGGACCA CCGTCATTTC TGGGTTTTCT CAGAACGGGA ATTACTCTGA AGCTTTAACG ATGTTTTTGT GTATGGAGAA AGACAAATCC GTGAAACCAA ACCATATTAC TCTAGTTAGT GTTCTCCCCG CTTGTGCGAA TCTAGGGGAA TTGGAGATTG GCCGAAGATT AGAAGGCTAT GCTAGAGAGA ACGGGTTCTT TGATAACATT TACGTGCGTA ATGCTACACT AGAGATGTAC TCAAAATGTG GAATGATTGA TGTAGCGAAA CGGTTATTCG ATGAAATTGG GAACCAGCGA AATTTGATCT CATGGAACTC CATGATCGGT AGTCTAGCTA CTCACGGGAA ACACGACGAA GCTCTTGAGC TTTATGCCCA AATGTTGCAA GAAGGAGAAA GACCCGATGC AGTGACATTT GTTGGATTGT TGCTAGCTTG TGTTCATGGT GGGATGGTGT TGAAGGGCAA AGAATTGTTC AAGTCCATGG AGGAAGTTCA CAAGATTTCG CCAAAGCTAG AGCACTATGG ATGCATGATC GATCTCTTGG GGCGTGTTGG GAAGCTGCAA GAAGCCTGTG ATCTCATCAA AACAATGCCA ATGAAACCAG ATGCTGTCGT ATGGGGAACC CTTTTGGGTG CTTGTAGTTT TCATGGCAAT GTTGAGATAG CAGAGATAGC AAGTGAGGCA CTGATGAAGC TTGAACCCAC AAATCCAGGT AACTGTGTGA TCATGTCAAA CATCTACGCA GCCAATGAGA AGTGGGATGG AGTTTTGAGG ATGCGGAAGT TGATGAAGAA GGAAACGATG ACAAAGGCTG CTGGATATAG CTATTTTGTG GAAGCAGGAG TTGAAGTTCA TAAATTTACT GTGGAAGATA AATCACACCC AAGATCTTAT GAGATCTATC AGGTTCTTGA CAAAATTTCC AGTAGAATGA AACCGAAGAA GAGTCGGTTT GATTCTATGC TTCAGCTTGA CCAAGTATGC ATATGAAAGG AGATGTTTTG TTTGTTCACT TGTCCAGTAA CAATGACTGA ATCTATTGA 
Length1589
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3314956.. 3319495
Download Sequence
A.thaliana
AGI-codeAT5G08510.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.0712 Ahg485300 Transducin/WD40 repeat-like superfamily protein
19.4936 Ahg489201 Cox19-like CHCH family protein
23.6643 Ahg476579 Protein of unknown function (DUF793)
25.2389 Ahg477838 ralf-like 22
25.7488 Ahg491073 DEAD/DEAH box RNA helicase family protein
30.1993 Ahg946460 calcineurin B-like protein 1
30.5778 Ahg925763 CYS, MET, PRO, and GLY protein 1
34.176 Ahg494514
43.6463 Ahg481962 Kinase interacting (KIP1-like) family protein
46 Ahg949608 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression