Detail



ID : Ahg927143

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927143|scaffold_202704.1
Sequence
TTGATACTCA AATAGGACGC CATGAAACCG TCGCAACCGC TATGTAACCG CATTATTGAT CAGCTTATTG CCGCAATGAT CCAGAACCGT CCATTCGACG CCGTTCTCGC TTCTTCAACG GTCGCGAATC CATGGACTCA GCAGCTCGTC TCCGATGTCC TCCGCTCTAT CCCCAGATTC TTCTTCATTT CCCCACGATC CATCGGTCGG CAAAAGGGTT TTCGTCACCG GTCGCCGTTA AAGCAGAGAA ACCTCAGTGA TGAATCACAA CGACGTCGTT CTGAAGTCCT AGTTCTAGGT CCCGGTGCGT ATATAGATCC TAAGAAAGTC TCTCTCGGGT TGCAGAAAGC ATTGGAGTTC TTCTTTTGGA TCGAGACCCA TTTCGGATTT GGTCATAATG AGATCACTTG CAGAGATATG GCTTGTCTAT TGGCCAAAGG CAATGACTTT AAGGGTCTCT GGGATTTTCT CCGGCAAGTC TCTAGAAGAG AGAACGGCAA AAATGTGGTC ACAACAGCGT CTATAACGTG TTTGATGAAA TGCCTAGGAG AAGAAGGTTT TGTTAAAGAG GCATTAGCTA CTTTTTATAG GATGAAGGAA TATCACTGCA AACCTGATGT TTATGCTTAC AATACAATTA TCAATGCTCT CTGCCGAGTG GGGAATTTCA AAAAAGCGAG ATTTCTGTTG GATCAGATGC AATTACCCGG TTTTCGATAC CCACCGGATA CCTATACTTA CACCATTTTA ATTAGCTCGT ATTGTAGATA TGGGATGCAA ACCGGATGCA GAAAGGCCAT AAGGAGGAGA ATGTGGGAGG CTAATCGAAT GTTTAGGGAA ATGCTGTTCA GAGGGTTTGT ACCCGATGTG GTGACTTATA ATTGCTTGAT CGATGGATGT TGCAAAACGA ATCGGATTGG TCGGGCTCTT GAGCTGTTTG AAGATATGAA GACAAAAGGG TGTGTACCGA ACCAGGTGAC TTATAATTCT TTCATAAGGT ATTATAGTGT TACCAATGAG ATAGAAGGTG CAATCGAGAT GATGAGGACA ATGAAGAAGA TGGGTCATGG TGTACCTGGT TCAAGCACGT ACACACCGCT AATACACGCT CTTGTTGAGA CCAGAAGAGC GGCTGAGGCT CGGGATTTGG TGGTGGAGAT GGTGGATGCT GGGTTGGTTC CGAGAGAGTA TACATATAAG TTGGTGTGGG ATGCTCTGAG CTCAGAAGGA ATGGCGGGTA CACTTGATGA AGAGCTGCAT AAGAGAATGA GGGAAGGAAT ACAACAGAGA TATACAAGAG TCATGAAGAT CAAACCGGTC ATGGCTCGAA AGGACGTTGT CCAAAAATCG GATTTTCACG AGATTGACAT GAATCAAAAT TATGCAATGG AGGAAATCTG ATAGATGTTG GTATAATTCA T 
Length1421
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16625615.. 16627031
Download Sequence
A.thaliana
AGI-codeAT1G77405.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.6015 Ahg477864 syntaxin of plants 43
21.2838 Ahg489951 RNA-dependent RNA polymerase 2
23.8747 Ahg329829 Tetratricopeptide repeat (TPR)-like superfamily protein
40.0999 Ahg927712 Pentatricopeptide repeat (PPR) superfamily protein
49.7996 Ahg478727 TATA binding protein 1
61.4166 Ahg483178 Tetratricopeptide repeat (TPR)-like superfamily protein
78.613 Ahg943524 CTP synthase family protein
82.5591 Ahg358384 calnexin 1
96.2289 Ahg353700 DNA topoisomerase, type IA, core
98.904 Ahg491483 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression