Detail



ID : Ahg477906

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477906|fgenesh2_kg.3__607__AT3G06050.1
Sequence
GTCTCGATCT CATTTTCAGC GATGGCGATG TCAATTCTAA AGCTAAGAAA TTTATCGGCT TTAAGGTCGG CCGCAAATAG TGCCCGGATC GGAGTTTCCT CGAGGGGTTT CTCAAAGCTT GCGGAGGGCG CTGACATAAC CTCGGCGGCT CCCGGCGTTT CTCTCCAGAA AGCTCGCAGC TGGGACGAAG GCGTTTCCTC CAAATTCTCC ACCACACCAT TGTCAGATAT CTTCAAGGGG AAGAAAGTCG TCATCTTTGG ACTCCCTGGG GCTTACACGG GAGTTTGTTC GCAGCAGCAT GTGCCTAGCT ACAAGAGCCA CATTGATAAG TTTAAGGCTA AAGGCATTGA TTCTGTCGTA TGTGTCTCTG TTAATGATCC CTATGCTATC AATGGTTGGG CTGAGAAGCT TGGTGCCAAA GATGCAATTG AGTTTTATGG GGATTTTGAT GGGAAATTCC ACAAAAGCTT GGGGCTAGAC AAGGATCTCT CTGCTGCATT ACTCGGGCCA CGGTCTGAGA GATGGTCGGC TTATGTAGAA GACGGTAAGG TTAAGGCGGT GAATGTGGAA GAAGCACCGT CTGACTTCAA GGTTACAGGG GCAGAAGTCA TCTTAGGACA GATCTAAAAG GGGTTTTTTC CAGAGTTGTT GTTTCTTCTG ACTTGCAACT GAAAATAAGT TTGATCCGAA CATGTTCCAA GGATCACACC AAGAAACAGC TTCACTTGTT TTTGTTTTGT TTCCACAGTT TCTGTTTCAA TAAAAATTAT GTGTTTTGCC GTTTCTCACC AAAATGTAAA TCGATCATAA TATAAATTAG AAACCAAT 
Length828
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2291444.. 2292972
Download Sequence
A.thaliana
AGI-codeAT3G06050.1
Descriptionperoxiredoxin IIF
TAIR curator summaryEncodes a mitochondrial matrix localized peroxiredoxin involved in redox homeostasis. Knockout mutants have reduced root growth under certain oxidative stress conditions.
Alias[ATPRXIIF][PRXIIF][PEROXIREDOXIN IIF][peroxiredoxin IIF]
Gene coexpression
MR
MR Locus Description
11.6189 Ahg493763 pfkB-like carbohydrate kinase family protein
20.2485 Ahg477651 TCP-1/cpn60 chaperonin family protein
22.8035 Ahg493513 winged-helix DNA-binding transcription factor family protein
23.6854 Ahg928711 tubulin folding cofactor B
24.8193 Ahg488367 Ribosomal protein L27 family protein
26.5707 Ahg495999 HSP20-like chaperones superfamily protein
27.9285 Ahg888609 thymidylate synthase 2
33.7639 Ahg932706 Mitochondrial substrate carrier family protein
34.9428 Ahg473241 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24
34.9428 Ahg473272 SIT4 phosphatase-associated family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression