Detail



ID : Ahg493763

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493763|fgenesh2_kg.7__3196__AT5G37850.2
Sequence
CAGCTCTTGA TGCAATTCTC CTTCCCGACA ACAACTACCA CTTCTCCTCG ATTCCTTAAT CAAAATCTCC GGTTTTGCTC AAACCTGAAT TAATTTTCAA TTATCGAGAA ATTGGAGAAT GACGACGCCT CCAGTTCTAT CTCTCGCTCT TCCTTCAGAC ACTGGTCGTG TTCTTAGTAT CCAATCCCAC ACTGTTCAGG GATATGTTGG TAACAAATCA GCTGTCTTTC CTCTTCAATT GTTGGGGTAT GATGTGGATC CAATTAACTC AGTACAATTC TCAAATCATA CTGGGTATCC TACGTTCAAA GGACAGGTTT TGAATGGTCA GCAATTGTGT GATTTGATTG AAGGTCTTGA AGCAAACGAT TTGTTGTTCT ACACTCATGT ATTAACAGGT TATATTGGAT CAGTGTCATT CCTGGATACA ATTTTGGAGG TTATCAATAA GCTTCGCGCT GTAAACCCGA AACTTACATA TGTATGTGAT CCGGTGATGG GTGATGAAGG AAAGTTGTAT GTGCCTGAAG AATTGGTACA TGTTTATCGT GAAAAGGTTG TTCCCCTGGC TTCTATGTTG ACTCCTAACC AGTTTGAGGC AGAGAAGTTA ACAGGATTAA GGATAAATTC TGAGGAAGAT GGCAGGGAAG CTTGTGCTAT TCTTCATGCA GCTGGTCCTT CAAAGGTTGT GATCACTAGC ATTACTATAG GAGGCATTCT ATTACTTATT GGAAGCCATC AGAAAGAAAA GGGTCTCAAG CCTGAGCAAT TCAAGATTTT GATACACAAA ATCCCTGCTT ATTTTACGGG AACAGGAGAT CTCATGACTG CTCTTCTACT TGGTTGGAGT AATAAATACC CGGACAACCT TGACAAGGCA GCCGAGCTTG CAGTTTCAAC GTTGCAGGCA CTTCTGCGAA GGACACTTGA TGATTACAAA CGCGCTGGGT ATGATCCTAC CTCAAGCAGT TTGGAGATTA GATTAATACA AAGCCAAGAA GAAATTCGCA ACCCAAATGT CGAACTGAAA GCTGAGAAAT ACAGCTGAAG CAGGTGAAAA TGTAACACAT TTATCATAAA ATAAGAAAAC ATAGATGATT TTGGGGATAC AATAATTATG TTGCACAATT CTTTTATGCA TATAAAAGAG TACAGACTTC AGAGTAATAG GATGTGCAAG AGCTCCTATA ACTCATTTAA AACAGCCGTT AGACTGTTTT GTTTGTGTAC TTATCTTTCT ATCATTTTGC TGGTGTTAAT ATGTT 
Length1265
Protein Sequence
Protein Residue
Map Locationscaffold_7: 19690462.. 19693874
Download Sequence
A.thaliana
AGI-codeAT5G37850.1
DescriptionpfkB-like carbohydrate kinase family protein
TAIR curator summaryEncodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+.
Alias[ATSOS4][SOS4][SALT OVERLY SENSITIVE 4]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg495044 mitotic checkpoint family protein
5.47723 Ahg942897 mRNAadenosine methylase
8.24621 Ahg471353 fumarylacetoacetase, putative
8.94427 Ahg491138 Transducin/WD40 repeat-like superfamily protein
9.59166 Ahg496342 inositol polyphosphate kinase 2 beta
11.6189 Ahg477906 peroxiredoxin IIF
12.9615 Ahg319110 Homeodomain-like superfamily protein
14.4568 Ahg491439 hemoglobin 3
17.4356 Ahg491904
22.0907 Ahg948169 myb-like transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression