Detail



ID : Ahg477651

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477651|fgenesh2_kg.3__352__AT3G03960.1
Sequence
TTCTCTCTAA ACACCTTCGA AAATCTCACA GAGCTTCTTC TTCGCTTTTA GGGTTTCTGC ACTTTTTCGG AGTGACCCAA CTTCAAAGCT TATAGATCGT TACCTGAGAA AATGGTGGGT ATGTCGATGC AGCCGTATGG TATCCAATCG ATGCTTAAAG AAGGTTACAG GCATCTCTCT GGTCTCGACG AAGCCGTCAT TAAGAACATT GAAGCTTGCA AGGAGCTCTC CACCATTACT CGCACCTCTC TCGGTCCCAA TGGAATGAAT AAAATGGTTA TCAATCATTT GGACAAACTA TTTGTCACGA ATGACGCTGC TACTATTGTG AATGAACTCG AGATTCAGCA CCCGGCTGCT AAACTTCTGG TTTTAGCTGC TAAGGCTCAG CAAGAAGAAA TCGGAGATGG AGCTAATCTG ACTATCTCTT TTGCTGGTGA GCTTCTTCAA AACGCTGAGG AGCTTATCAG GATGGGGCTT CATCCGAGTG AGATCATTAG TGGATATACT AAAGCTGTCA ACAAGGCTGT TGAAATACTG GAACAACTGG TTGAGAGTGG TTCTGAGACC ATGGATGTTC GTAACAAGGA TGAAGTTATT TCTCGGATGA GAGCAGCTGT TGCAAGCAAG CAGTTTGGGC AAGAGGAAAT AATATGCTCT TTAGTTGCTG ACGCATGTAT TCAAGTGTGC CCAAAGAATC CGACAAACTT CAATGTGGAT AATGTCCGTG TTGCCAAGCT TTTGGGAGGA GGCTTGCACA ATTCTTGCAT AGTCCGTGGT ATGGTCTTGA AAAGTGATGC TGTTGGTAGC ATTAAGCGAA TGGAGAAGGC GAAGGTTGCT GTATTTGCTG GCGGCGTTGA TACTACCGCA ACCGAGACCA AAGGAACTGT CCTCATTCAT AGTGCTGAGC AGCTAGAGAA CTATGCAAAG ACAGAGGAAG CTAAAGTTGA GGAGTTGATT AAAGCTGTTG CAGAATCAGG AGCCAAAGTA ATTGTTAGTG GGGGATCAAT TGGAGAAATG GCATTGCATT TCTGTGAGCG CTACAAGATA ATGGTATTGA AAATCAGCTC AAAGTTTGAA CTGAGGCGCT TCTGCCGTAC AGCTGGGGCT GTCGCCCATT TGAAGCTTAG CCGGCCAAGC CCTGATGATC TGGGATATGT TGATTCTATA TCAGTTGAGG AAATTGGTGG TGTGACAGTC ACGATTGCAA GAAACGAGGA AGGTGGTAAC TCCATCTCTA CCGTGGTTTT GCGTGGAAGC ACAGATAGCA TTTTGGACGA CCTTGAGAGA GCTGTTGATG ATGGTGTTAA TACATACAAG GCCATGTGCA GAGACAGCCG TATTGTTCCC GGGGCTGCAG CTACCGAGAT AGAATTGGCT CAAAGATTGA AGGAATATGC CAATGCAGAA ATAGGGTTAG ACAAATATGC CATCTCCAAA TACGCTGAGA GTTTTGAGTT TGTACCCAAA ACCCTTGCAG ATAATGCTGG CCTCAATGCC ATGGAAATCA TAGCCGCTCT GTACACTGGA CATGGATCTG GAAACACAAA ACTAGGCATT GACTTAGAGG AAGGTGCTTG TAAAGATGTT TCAGAGACAA AAGTATGGGA TCTTTTTGCA ACCAAGTTAT TTGCTCTTAG ATATGCTTCA GATGCTGCAT GCACTGTACT TCGTGTAGAC CAGATTATAA TGGCGAAACC AGCCGGTGGA CCAAGGAGAG ATGCAGCTCA AGCTGCAGGT GCTGGTGCGG AGGAAGACTA AGCCGGAGAA CAATTACCTC GTAGTGAAGC TCTCTCTTCT TTTGTAACCT TTTGTTCTTT CAATTCTGAG AAAATTTTGG TGTGTCTCAG TTTAAGATTT GTGATCTTTG TATAACACAC CTACTTAAGT GTTTTGCCTT CTTTTTTTGT TCAACTCTGA AATTTTCCGG TTTAGCTAGT GAAATTATTA CTAGGACCTT 
Length1960
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1231665.. 1235369
Download Sequence
A.thaliana
AGI-codeAT3G03960.1
DescriptionTCP-1/cpn60 chaperonin family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.79583 Ahg909633 Ribosomal protein L30/L7 family protein
6.48074 Ahg940006 RP non-ATPase subunit 8A
7.74597 Ahg480524 nucleosome assembly protein 1;2
7.74597 Ahg487708 ATP synthase alpha/beta family protein
8.12404 Ahg491623 Class II aminoacyl-tRNA and biotin synthetases superfamily protein
10.3923 Ahg492789 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
11.0905 Ahg478926 cobalt ion binding
13.9642 Ahg489000 eukaryotic translation initiation factor 2 beta subunit
16.5227 Ahg943696 NAD-dependent malic enzyme 2
17.72 Ahg947841 ribosomal protein L5 B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression