Detail



ID : Ahg477982

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477982|fgenesh2_kg.3__683__AT3G06660.1
Sequence
GGAGGAGATA AAGATTTTGG GCACCTCTCT TCCACATTTA CCCTTCACTT AAAGCCAATC GAGAGACTTC TTCTTCTTCT TCTCAACTCC ATTATCTAAT TCTAGGGTTT TTTTTTCTCT CCTTCTTCTT CGCGCTTCTC TTTCCCTCGA AAAACTGGTG TTACTGTGAG TTTCTCGTTT GAATTTTGGG GATTTCTTAA AGAATTCACT GAGAAGAAGG CTTTAGAGGT GGGTTTATCG TTTTTTAGTT ATGGATATCA CTATTTTATT ATAATGGAGG GATGTGAAGC TTCTGCTTCT TCTTTAGCTG GCTTTACCGG TAGGAGAAGG AGAAGCGCTC TGCCTCGTCG ACCCCGCGTT ATAAATGGGA GCGCCCATAG TTTCAAGTTC TTGCCACCTT CAACACAGGC AAACACCAAT AGTCTCTGTG GGTCTGTGAG TGAGAACAAA CTGAAACTGA AGCTTAAGCT TGGTGGTGGT GTTACTCGTA CGTTGCAAAC CAACTCTGAG GCGGGTCTTT ATTCCAAAGC TTTGGATAAT GGACAAAAGC CATTTCAAAA TAAGGTAAAA GGCAATAGTC ATGTTCAGAA AACACTGTTT CTAGGAGATA TCCATCAATC TAGAGGATAT CCGTCTGAGA CTGGGAACCG AATCTCCATG TCTGAGAAGA GCAAACGAGG TCTTAAGAAA CGTGTATTGG ATCCAGAACC AGACAGTGAT GATGATGGAG ATGAGGAAAT CAGATACCTC GTAAAGTTAA AGTCTAAAAG GGTCAGGGAC TCTCATGAAG GTAAAGAGAG TGAAGGAGGC ACAAGGATAC ACAGCAATGG TCATGACATG GAAGACACAA AACATCCCTC ATCAGACAAA CTTGCTGTAT CCGGAAGGAA AAAGCCGAAG ATGGGAATGG TTGATCCGCT TCCAGCAGGA GCGACAAGCG GGCAAATTCC TACTACACGT ACTCGGGCTC TCCAATCTGG AACGGATCCA CATTCTGTCA TTGGGTCGGG GCCTCTTGAA TTCCCTGATG GCTTACCTTG CCCCTCATCT AAAAGACCAA AACAGAAGCT TTCTGAGGTA GAGCAACAAT CCAAGAAGGC CGAAGCTGCA CAGAGACGGC GAATGCAGTC TGAGAAGGCT GCCCAAGAAG CCGAGGCTGA AGCTATCAGG AAAATACTTG GGCAAGATTC TGGGAGAAAG AAAAAAGAGG AGAAGATCAA AAAACAACAG GAAGAACGAG CTCAGGAGAG AGCTGCAAGA TCAAGCACAC TCGCATCAAA CACTATCAGA TTGGTGATTG GTCCAAGTGG AACAACTATG ACATTTTCTG AAGACATTGG TCTTCCGGAT ATCTTCAAGC CAATCACGTA TAGTTATCCT CCTCCACGAG AGAAATGTGT GGGACCAAAT TGCGAGAAAG CTTACAAGTA CAGGGATTCA AAGTCGAAGC TGCCATTATG CAGTCTCGGA TGTTACAAGG CCATTCAAGA GAAGATGGAA CAAGCACTGA TTCATTGCTA ATTGCTTAAC 
Length1530
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2617319.. 2619627
Download Sequence
A.thaliana
AGI-codeAT3G06660.1
DescriptionPAPA-1-like family protein / zinc finger (HIT type) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg356151 DNA/RNA polymerases superfamily protein
9.38083 Ahg919404 Insulinase (Peptidase family M16) family protein
10.7703 Ahg485283 defective in meristem silencing 3
10.7703 Ahg476678 ornithine carbamoyltransferase
19.0788 Ahg893903 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative
20.9762 Ahg486509 embryo sac development arrest 14
27.9106 Ahg473458
28.4605 Ahg342721
32.9848 Ahg471082 Pseudouridine synthase family protein
44.4972 Ahg347582 Transducin family protein / WD-40 repeat family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression