| Annotation |
|---|
| Description | jgi|Araly1|477986|fgenesh2_kg.3__687__AT3G06720.1 |
| Sequence |
GCTTTCATTC TTTGGTTGCG CTGTTGTCAA CTTGTCCCTC GCTGCCTCTG CTTCTTAACT CTTTATCACT TTTTCACTCC CAAATCAATT TTTAGGGTTT TTTTTTTTTT TTTTAAATTT TATTTGCTCT CCGCAGGATC TATATATACA CAAACCACTC GTTGCGTGTG TCTGTGAGCA TTCATTGATC GGGTTAATTT CTCTTTTATC GGATTTTCCT TGTCGAGCCA GAGCCATGTC GCTGAGACCC AACGCCAGGA CGGAGGTTCG CCGGAACAGG TACAAAGTTG CTGTGGATGC GGAGGAAGGA CGACGGAGGA GAGAGGACAA CATGGTTGAG ATCCGTAAAA GTAAGCGTGA GGAGAGTTTG ATGAAGAAGA GACGTGAAGG TATGCAAGCT CTTCAGGATT TCCCTTCAGC TTCCGCCGCC TCCGTCGATA AGAAGTTGGA GAGTTTGCAG GATATGGTCG CTGGGGTTTT GTCCGATGAT CCTGCCTTGC AGCTTGAGTC CACTACTCAG TTCAGGAAGC TTCTCTCTAT TGAGAGAAGT CCTCCAATCG AGGAAGTGAT AGCTGCTGGT GTTGTTCCTC GGTTTGTTGA GTTTCTTAAG AAAGAAGATT ACCCCGCGAT TCAGTTTGAG GCAGCTTGGG CTCTGACAAA CATTGCATCT GGAACATCCG ATCACACTAA GGTTGTAATC GATCACAATG CTGTTCCAGT CTTTGTACAG CTTCTTGCTT CCCCTAGCGA TGATGTCCGT GAGCAGGCTG TATGGGCTTT GGGTAACGTT GCTGGTGATT CACCACGGTG CCGTGATCTT GTTCTTGGAT GTAGGGCACT GCTTCCGCTG CTCAATCAGC TTAATGAGCA TGCCAAATTG TCCATGCTTC GAAATGCCAC ATGGACCTTG TCAAACTTCT GTCGTGGCAA GCCTCAGCCT CACTTTGACC AGGTGAAACC TGCTCTTCCG GCCCTTGAAC GACTAATTCA TTCAAATGAT GAAGAAGTCT TGACAGATGC CTGTTGGGCT CTCTCATACC TCTCTGATGG GACCAATGAC AAAATCCAGA CTGTCATCGA GGCCGGTGTT GTCCCAAGAC TTGTTGAACT TCTCCTCCAT CCTTCTCCAT CTGTGCTAAT TCCTGCACTT CGCACTGTTG GAAATATAGT TACTGGAGAT GATTTACAAA CACAGTGGGT GATCAATAGT GGTGCTCTAC CTTGTCTTGC CAACTTGCTC ACTCAAAACT ATAAGAAAAG CATAAAGAAG GAAGCTTGCT GGACGATTTC AAACATCACA GCAGGCAACA AAGATCAGAT CCAGACGGTA GTTGAGGCTA ATTTGATTGC CCCGCTGGTG AGTCTGCTTC AAAATGCTGA ATTTGACATT AAGAAAGAAG CTGCATGGGC AATTTCAAAT GCAACTTCAG GTGGTTCTCA TGATCAAATC AAACACCTGG TGGAGCAAGG ATGCATAAAA CCATTATGCG ACCTCCTAGT ATGCCCAGAT CCAAGAATCA TAACGGTGTG CCTTGAAGGA TTGGAAAACA TTTTGAAGGT GGGAGAGGCA GAGAAGAACT TGGGTAACAC AGGAGACATG AACTATTACG CACAGCTGAT TGATGATGCA GAAGGGCTAG AAAAGATTGA GAACCTTCAG AGCCATGACA ACAATGAGAT CTATGAGAAG GCTGTTAAAA TTCTGGAGAC ATACTGGCTT GAAGAGGAAG ATGATGAGAC ACAGCAACCT CCAGGTGTTG ATGGTTCTCA GGCTGGGTTC CAGTTTGGAG GGAATCAAGC TCCAGTCCCA TCCGGAGGAT TCAACTTCAG CTGAAGGTAA AAAAAAGAAT GGAATTGGAA GCTTGCAACT TGAGAATGGT GAAAGGTCAG AGTCAGTCAG AGTCTAGTTT CATTGCCAGG GTTATAGCCC TGGTCTGGTC TGGTCTGGTC TGGTTCAGAG GTCTGTACCG GGTGGTCGGT TTAAAAGTAC AGAGTCTGAG AAAGTGGTTG GTTTCATTGT CCAGGGCTAT TTTTTTGAAA TGACTGGTAC ACCGGTCGTG GGTCGACTTT TGTGTTGTTT TAAAATTTTA CACTGGAGTC TTTGTTTTTG TGTTCACAAC AGTTTGTATG TCGGTTAAAA AGTCTTAATA TGTTTGGTGT CTGATAAGAA TGTTTATTTG AATTATGAAG GAA |
| Length | 2193 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 2632448.. 2636128 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G06720.1 |
| Description | importin alpha isoform 1 |
| TAIR curator summary | Encodes importin alpha involved in nuclear import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. |
| Alias | [AIMP ALPHA][AT-IMP][ATKAP ALPHA][IMPA-1][IMPA1][IMPORTIN ALPHA][importin alpha isoform 1][IMPORTIN ALPHA ISOFORM 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.19615 |
Ahg496840 | ADP-ribosylation factor-like A1D |
| 5.47723 |
Ahg473738 | |
| 7.74597 |
Ahg897324 | DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
| 10.247 |
Ahg328440 | glycine-rich protein |
| 15.2971 |
Ahg329122 | zinc finger WD40 repeat protein 1 |
| 16.3401 |
Ahg488386 | U-box domain-containing protein |
| 17.9444 |
Ahg312946 | Alba DNA/RNA-binding protein |
| 20.9762 |
Ahg919333 | Peptidase S24/S26A/S26B/S26C family protein |
| 26.9444 |
Ahg311783 | Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein |
| 27.7128 |
Ahg477718 | Nucleotidylyl transferase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|