Detail


ID : Ahg478055

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478055|fgenesh2_kg.3__756__AT3G07330.1
Sequence
AAGACAGTGG GACGAAAGAC GACGTCATCT CTCTCTATTG TTAGTAAGTT TTAGCCCAAT CGTGTCCTCT CTGCCTTTGT CTCCCAAATT CTCAGATCTA ATCAGATCGA TTCTCCTGAT TTCATCAGCT TCGAGAGAGA TTCTCTTTTC CTTTCTCGTT GAATGTCTCG CTCCCAGAAC GAGGAGTTTC AACAATGGTG GAACAAGCAA CGAGATAGGA ACAATCACGA CGTTCTTTAC ACCGGCGACG ATGAAGCATT CCTCACCGTT GAAATCCGTA CTCCGGCCAC CGTTGACCCG GATAAGGATC GGATCCGGAC CCGTACCGCT CGTCAGCTCT CTCGTCTCTA CCTCCTCAAG TTCAAGCAAC TCGCATCTTC CTTCGTCTGG ATCGGTAACT CTTTCCTTTA CCTTGTTCGC ACCGCCAATC GCCGCATTGC CAACGATAAT CCTCCATCTG TCTCCTCCTC CGCTAGATTG TACCGTCTAA TCAAGGGATT TCTCGTTGTT GTTGTGCTTC TTCTCTGTTT CGAGCTTGCC GCTTATTTCA AGGGATGGCA CTTCACACCT CCCTCTGTCG CCTCCGCCGA GGTCGCCGTG GAGGTGGTTT ACGCTTGGTG GTTGGAGATC AGGGCGTCTT ATCTCGCGCC GCCGCTTCAG AGCTTGACCA ATGTATGTAT AGTTCTCTTC TTGATTCAAT CGGTTGACCG TCTGGTGCTT GTGCTTGGAT GCTTCTGGAT CAAGCTTCGC CGCATTAAGC CTGTTGCATC TATGGCGTAC CCGACTAAAT TGGTTGGAGA GGGAGTTAGA TTGGAAGATT ATCCAATGGT GATTGTTCAG ATTCCAATGT GCAATGAAAA GGAGGTTTAC CAACAATCTA TTGGAGCTGT GTGTATGCTT GACTGGCCAA GGGAGAGAAT GCTAGTTCAG GTTCTTGATG ACTCCAGTGA GTTAGATGTT CAGCAGCTTA TAAAAGCTGA AGTACAGAAA TGGCAACAAA GGGGTGTAAG GATAGTGTAT AGACACCGTC TCATACGTAC TGGTTACAAG GCTGGAAACC TTAAAGCTGC AATGAACTGT GAATACGTCA AAGACTACGA ATTTGTTGCC ATATTTGATG CGGATTTCCA GCCACCAGCG GATTTCTTGA AGAAAACTGT GCCTCACTTT AAGGGTAATG ATGAATTAGC CTTGGTCCAA ACACGGTGGG CTTTTGTGAA CAAAGACGAA AACTTGCTTA CAAGACTCCA GAACATAAAT TTGTCTTTCC ACTTTGAAGT TGAACAGCAG GTTAATGGTG TCTTTATTAA CTTCTTTGGC TTTAATGGAA CTGCTGGTGT TTGGAGAATC AAAGCCCTCG AGGACTGCGG GGGATGGTTG GAGCGAACAA CTGTTGAAGA CATGGATATT GCCGTTCGTG CGCATCTTTG CGGATGGAAG TTCATTTATC TGAATGATGT AAAGTGTCTC TGTGAACTTC CGGAGTCCTA TGAGGCATAC AAAAAACAGC AATACCGTTG GCATTCGGGT CCAATGCAAT TGTTCCGTTT GTGCTTCTTT GACATTCTTC GGTCAAAGGT GAGTGTTGCC AAGAAAGCAA ATATGATATT TCTCTTCTTC TTGCTACGGA AGCTTATCTT GCCATTCTAC TCATTCACGC TCTTCTGCGT CATTCTTCCA TTAACAATGT TCTTCCCAGA AGCTAACTTA CCATCTTGGG TTGTTTGCTA CATCCCTGGG ATCATGTCCA TCTTAAACAT CATCCCAGCC CCAAGATCCT TCCCTTTCAT AGTTCCATAT CTCCTTTTCG AAAACACCAT GTCAGTTACC AAATTTGGAG CCATGATCTC TGGTTTGTTC AAGTTTGGAA GTTCTTACGA GTGGGTAGTC ACCAAAAAGC TTGGGAGATC CTCTGAGGCT GATCTGGTTG CATACGCAGA GTCAGGTTCT CTGGCCGAGT CCACAACCAT CCAAAGATCA TCCTCTGATT CAGGTCTGAC TGAGCTTAGC AAACTAGGAG CAGCAAAGAA AGCTGGCACG ACCAAAAGAA ACCGTCTGTA CAGAACAGAG ATCGCACTTG CGTTTATCCT CTTGGCAGCT TCGGTGAGAA GCTTGTTGTC TGCGCAAGGG ATCCATTTCT ACTTCCTCTT GTTCCAAGGA ATCACTTTCG TTGTTGTCGG TCTAGATTTG ATCGGGGAAC AGGTCAGTTA GTTTATATAA CCTTTTTTGT CAGTTTAAAA CTACATTGAA CCATACCACC GGAAGAATGA ACAAGACCCA AAGACCAAGT CAGGAAGGAA CGAACCAACT CACTCGCAGG TCTTTTCGTT ACAGATAGAT ACATAAAAAC AATTCATTTA AAGTTTCTGT CTTGGGAACA TGATTCTATA CTCTACTTGG GTTGGTTTAG ATTCTTCCTT TTTTTACGGA TAGTATTAGA GAATGGCAGA AAGAGCCGTC GAAGAGGATT CCAAAGACTT GCCTTCCTGT CTTTGTTGTG GTATTAAGCC AAAACTTGGT TTTTTTGTTG TGCAAAAATT GTTGTTAGGT TGTTCGTTTT TGTTTCGGAT GATGTGGCAG AAACATCTTT TAAGATTTGC TCTAATGCCA CTCTCAAATT CTTTGTTGTT GTTGTTTCTC TCTTATGGGT TCATTTATT
Length2659
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2898737.. 2902497
Download Sequence
A.thaliana
AGI-codeAT3G07330.1
DescriptionCellulose-synthase-like C6
TAIR curator summaryencodes a gene similar to cellulose synthase
Alias[ATCSLC06][ATCSLC6][CSLC06][CSLC6][Cellulose-synthase-like C6][CELLULOSE-SYNTHASE LIKE C6]
Gene coexpression
MR
MR Locus Description
14.6969 Ahg328625 WRKY DNA-binding protein 32
15.3623 Ahg490251 RNA-binding protein-defense related 1
16.7332 Ahg471065 F-box and associated interaction domains-containing protein
23.6643 Ahg478354 Reticulon family protein
26.3249 Ahg490244 GRR1-like protein 1
27.1662 Ahg941351 apyrase 2
28.4605 Ahg479402 transducin family protein / WD-40 repeat family protein
30.6105 Ahg930445 topoisomerase II
49.4975 Ahg483068 HXXXD-type acyl-transferase family protein
57.9655 Ahg484484 membrane-anchored ubiquitin-fold protein 4 precursor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression