| Annotation |
|---|
| Description | jgi|Araly1|490244|fgenesh2_kg.6__3378__AT4G03190.1 |
| Sequence |
AAATCTCAAA CCTTTTTTTT TCATTTCTTG ATCTCTCTCT CTCTGTTCTG ATGGGTCTCC GATTACCATC TAAGGTTCTG GAACATATCC TCTCCTTCAT TGATTCCAAC GAGGACCGGA ACTCTGTTTC TCTGGTCTGC AAGTCATGGT TCGAGACAGA GCGGAAGACT AGGAAGCGGG TCTTTGTCGG AAACTGTTAC GCGGTTAGTC CTGCTGCAGT TGCAAAGCGG TTCCCGGAGA TGAGATCTTT GACTTTGAAG GGGAAGCCAC ACTTCGCCGA CTATAATTTG GTTCCTGATG GTTGGGGTGG TTATGCTTGG CCGTGGATTG AAGCCATGGC GGCGAAATGT TCGTCTCTTG AGGAGATCAG ATTGAAGAGA ATGGTGGTGA CTGATGAATG CTTAGAAAAA ATTGCTGCTT CGTTTAAGGA TTTTAAAGTC CTTGTATTGA CTTCTTGTGA AGGTTTCTCT ACTGATGGTA TCGCTGCTAT TGCAGCAACT TGCAGAAACT TGAGAGTGTT GGAACTACGA GAGTGTATTG TTGAAGATCT AGGAGGAGAT TGGCTTAGCT ATTTTCCAGA GACTTCAACT TCTCTGGTCT CTCTTGACTT CTCTTGTTTA GATTCTGAGG TTAAAATCTC GGACTTAGAG CGTCTCGTGA GCAGATCTCC AAACCTGAAG TCTCTAAAGT TGAATCCAGC TGTGACTCTA GATGGACTTG TTAGCTTACT TCGTCGTGCT CCACAACTGA CTGAGCTCGG CACAGGTTCT TTCGCAGCTC AACTGAAACC AGAAGCGTTT TCAAAGTTAT CAGAAGCTTT TTCAAACTGT AAGCAACTTC AGAGCTTATC TGGTCTCTGG GATGTCCTCC CTGAATATCT TCCAGCTCTT TATTCTGTCT GTCCTGGTCT TACCTCGTTG AACTTGAGCT ACGCTACTGT CCGAATGCCT GATCTTGTCG AGCTTCTTAG GCGATGCTCG AAACTGCAGA AGCTATGGGT GATGGACTTG ATAGAGGACA AAGGTCTTGA AGCTGTTGCC TCCTATTGCA AGGAACTGCG AGAACTGAGG GTGTTTCCAT CTGCGCCAGA TCTCGATGAA GCCAACATAC CTCTGACGGA ACAAGGCCTG GTCTTTGTGT CTAAAGGCTG TCGAAAGCTG GAGTCTGTTC TCTACTTCTG TGTCCAGTTC ACAAACGCAG CTTTGCTTAC CATAGCAAGA AAACGTCCGA ATCTCAAGTG CTTCCGTCTC TGTGTGATAG AGCCATTTGC TCCTGATTAC AAAACAAATG AGCCACTTGA TAAAGGATTC AAAGCAATAG CTGAGGGATG CAAGGATCTT CGACGGCTCT CCGTCTCTGG TCTCCTCTCC GACAAGGCCT TCAAATACAT TGGGAAACAT GCAAAGAAGG TAAGGATGCT ATCAATAGCA TTTGCTGGGG ACAGTGATTT GATGCTTCAT CACTTGTTGT CGGGCTGTGA GAGTTTAAAG AAGCTTGAGA TAAGAGATTG CCCTTTCGGA GACACTGCAC TACTGGAGCA CGCTGCCAAA CTGGAAACCA TGCGATCCCT TTGGATGTCG TCTTGCTTTG TAAGTTTTGG TGCTTGCAAG CTTCTAAGTC AGAAAATGCC AAGGCTCAAT GTCGAAGTTA TTGATGAACA TCCTCCGGAG ACAAGACCTG AGAGCTCTCC AGTTGAGAGG ATATACATAT ATAGAACAGT CGCTGGACCG AGAATGGACA CGCCTGAATT TGTGTGGACG ATTCACAAGA ATCCTGAGAT CGGAGTTTCA CATCTAGCCA TAAAGTAACC TTGCTGCTTC AGTCATATTT TCCTTATCAT CTTGAGTTTT TGCAGACATT GTTGTGGGAG ATTCACCTTC CATTTGTTCC CTTTCATATT GTTTTCACTA AGATGTTAGA ATATCAGTTA TAGAAGCATT TCATAGCTTG TACTCTGTTA AACAAA |
| Length | 1966 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 21847120.. 21849246 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G03190.1 |
| Description | GRR1-like protein 1 |
| TAIR curator summary | Encodes an F box protein belonging to the TIR1 subfamily. This protein forms SCF complexes with ASK1 and CUL1 and interacts with Aux/IAA proteins in an auxin-dependent manner. It also has sequence similarity to the yeast protein GRR1, which is involved in glucose repression. |
| Alias | [AFB1][ATGRH1][GRH1][AUXIN SIGNALING F BOX PROTEIN 1][GRR1-like protein 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg913807 | transposable element gene |
| 14.1774 |
Ahg934183 | Leucine-rich repeat protein kinase family protein |
| 15.0333 |
Ahg935712 | AMP-dependent synthetase and ligase family protein |
| 15.4272 |
Ahg495366 | Ribonuclease P protein subunit P38-related |
| 19.6214 |
Ahg921503 | ARM repeat superfamily protein |
| 22.2935 |
Ahg330877 | phloem protein 2-B8 |
| 23.1517 |
Ahg474334 | Major facilitator superfamily protein |
| 26.3249 |
Ahg478055 | Cellulose-synthase-like C6 |
| 27.7128 |
Ahg474706 | PHD finger protein-related |
| 30.8869 |
Ahg940220 | Integrase-type DNA-binding superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|