| Annotation |
|---|
| Description | jgi|Araly1|478142|fgenesh2_kg.3__843__AT3G08010.1 |
| Sequence |
AAGGAGTAAC CGAAAAGGAT AAATCGTTTC TTCTTCTTCT TCTTCTTCTT CTATTCTTCG TGCTAAAGCT TACTCCTTTT CAATGGCGAC GTTAGGCTTT AACACCACTC GAATCCAGAC ACCATCACTT CCGAGAATCC CTAAACCTTC TTCTTTTACT AAACCCATCA AAACCCATCA TCTCTTCTCC TCCGAAATTC TGTTGAAACG CTGTCGTTTC GTGTCTAGAT CGTTGCCTGA GAGCTCACTG TCGATTACAA AAGAACAAGA AGTAGCTAAT GAAGTAGAGG AAGATGATCC AACGTCGGAG CTGAGTTATC TGGATCCGGA ATCCGATGCC GATAGCATCA AAGAGTGGGA ATTGGATTTC TGCTCGAGGC CAATTCTTGA TTCCAGAGGG AAAAAGATTT GGGAGCTTGT GGTTTGTGAT GCTTCACTCT CCCTTCAAGT CACTAAATAC TTCCCCAATA ATGTCATTAA TAGTATTACT CTCAAAGACG CCATTGTTAC CATCACTCAA GACTTGGGTG TTCCTCTTCC TGAGAAGATT CGCTTCTTCA GGTCACAGAT GCAAACCATT ATCACAAAAG CTTGCAAAGA GCTTGCCATA AAGGCAGTGC CTAGTAAACG GTGTCTGTCT CTGTTTCTGT GGTTGCAAGA ACGTTATGAC ACTGTGTACA CGCGTCATCC CGGGTTTCAA AAGGGATCAT TGCCTCTTCT GTCTCTAGAC AATCCCTTTC CAATGAATCT TCCGGAGAAC TTGTTTGGGG AGAAATGGGC ATTTGTTCAA TTACCTTACT CAGCTGTTAG AGAGGAGATC TCAAACTTTG ACGAGAAGTT TGTGTTTGGT GCTACCTTAG ACTTGGATTT GCTTGGCATT GAAGTGGATG AGAATACACT GATTCCTGGT CTCTCTGTTG CTACTTCACG AGCCAAACCT CTAGGAGCTT GGATGAATGG GCTTGAAGTA TGTTCGATTG AAGCAGACAG TTCCAAAGGA TGTTTGATTC TATCAGTTGG GATCGCGACA AGGTATGTCT ACGCGACCTA TAAGAAGACC CCTGTCACTA CTGATGAAGC TGATGCTTGG GAATCTGCAA AGAAAGCAAG TGGAGGTTTG CATTTTCTTG CAATTCAAGA TGACTTAGAT TCTGATGACT GTGTTGGCTT TTGGCTTCTT ATTGATTTGC CACCACCCCC TGTTTGATTT CCCCTTTGAT AAATGTTTAT ACCATATTTT GCCATTTAGT AACAAAGATT TCTCACAAGC TTGAATTTGA ACAAATTG |
| Length | 1288 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 3141764.. 3143310 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G08010.1 |
| Description | RNA binding |
| TAIR curator summary | Encodes a chloroplast-localized protein ATAB2. ATAB2 is involved in the biogenesis of Photosystem I and II. ATAB2 has A/U-rich RNA-binding activity and presumably functions as an activator of translation with targets at PS I and PS II. |
| Alias | [ATAB2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.85565 |
Ahg494802 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 8.12404 |
Ahg487216 | limit dextrinase |
| 20.8327 |
Ahg496464 | peroxin 14 |
| 27.4226 |
Ahg475077 | Translation elongation factor EFG/EF2 protein |
| 28.1425 |
Ahg485109 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 29.189 |
Ahg928451 | Rubisco methyltransferase family protein |
| 29.5635 |
Ahg480465 | protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases |
| 31.7962 |
Ahg935283 | Plant stearoyl-acyl-carrier-protein desaturase family protein |
| 37.229 |
Ahg474875 | |
| 38.7298 |
Ahg311317 | Protein of unknown function (DUF1138) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|