| Annotation |
|---|
| Description | jgi|Araly1|475077|fgenesh2_kg.2__207__AT1G62750.1 |
| Sequence |
AGTGATACGT TAGCCAAAGA GTGACCAATT GATTCAATAT CATCAAGAAG AAGAAGAAGA AGAAGAAGAA GAAGAAGAAA GAAGCGATTT TGATAAAAAT GGCGGCGGAT GCTCTGAGAA TTTCGAGTTC TAGTTCTGGT TCGTTAGTTT GTAATCTTAA TGGTTCACAA AGACGACCTG TTCTTCTTCC TCTGTCTCAT CGTCCAACGT TTCTGGGTCT TCCTCCTCGA GCTTCATCTT CTTCCATTTC TTCTTCAATT CCTCAGTTTC TGGGTACTTC TCGTATTGGG CTTGGTTCTT CCAAGCTCTC ACACAAGAAG AAATTCTCAG TCTTCGCTGC AGCTGAAGGA GAGGCTAAGC GCGCTGTACC GCTTAAAGAT TACCGAAACA TCGGTATTAT GGCTCACATA GACGCGGGAA AAACTACAAC AACTGAGAGG ATTCTTTACT ACACAGGAAG AAACTACAAA ATCGGTGAAG TTCATGAAGG GACAGCTACA ATGGATTGGA TGGAACAAGA GCAAGAAAGA GGAATCACTA TTACCTCAGC TGCAACCACA ACGTTTTGGG ACAAACATAG GATTAATATT ATTGATACAC CGGGTCACGT CGATTTCACT CTTGAAGTTG AACGTGCTCT TAGAGTTCTC GATGGAGCTA TATGCTTGTT TGATAGTGTT GCTGGTGTTG AGCCTCAGTC TGAGACTGTG TGGAGACAAG CTGATAAATA CGGTGTGCCT CGGATTTGCT TTGTTAACAA GATGGACCGT CTTGGAGCTA ACTTTTTCAG GACTAGGGAC ATGATTGTGA CCAATTTGGG TGCTAAGCCA TTGGTGCTTC AGATTCCAAT TGGTGCTGAA GATGTCTTTA AAGGTGTTGT TGATCTTGTG AGGATGAAAG CTATAGTTTG GTCAGGAGAA GAGCTTGGTG CCAAGTTCAG TTACGAGGAT ATTCCAGTGG ATCTTGAAGA TTTGGCTCAA GAGTATCGGG CTGCGATGAT GGAATTGATT GTTGATTTGG ATGATGAGGT CATGGAGAAC TATTTAGAAG GAGTTGAGCC TGACGAGGCC ACGGTAAAGA GATTAGTTAG AAAAGGAACC ATCACCGGCA AGTTTGTGCC TATTCTATGT GGTTCAGCCT TTAAGAATAA AGGTGTGCAG CCATTGCTTG ATGCTGTGGT TGATTATCTG CCTTCGCCGG TTGAAGTCCC GCCGATGAAC GGAACAGATC CTGAGAACCC GGAAGTTACC ATTATACGGA AACCAGATGA TGATGAGCCA TTTGCTGGGT TAGCATTCAA GATCATGAGT GATCCTTTTG TGGGTTCTCT TACATTTGTG AGGGTTTACT CAGGGAAAAT CTCGGCTGGT TCTTACGTGT TGAATGCTAA CAAAGGAAAG AAGGAGAGAA TCGGAAGACT ATTGGAAATG CACGCAAATA GCAGAGAAGA TGTTAAAGTG GCTTTGACAG GTGACATTAT CGCTCTTGCG GGTCTCAAAG ATACAATCAC TGGTGAGACC CTGAGTGATC CAGAAAACCC TGTTGTTCTT GAACGAATGG ACTTCCCTGA TCCCGTCATC AAGGTAGCGA TTGAGCCAAA AACGAAAGCA GACATTGATA AAATGGCGAC AGGATTGATC AAGCTCGCTC AAGAAGACCC GTCTTTCCAT TTTTCCCGTG ATGAAGAGTT GAACCAAACC GTCATTGAAG GAATGGGAGA ACTTCATCTC GAGATTATCG TTGACAGACT TAAAAGAGAG TTCAAGGTGG AGGCTAACGT TGGTGCACCA CAAGTCAACT ACCGTGAGAG TATCTCCAAA ATAGCGGAAG TGAAATACAC ACACAAGAAG CAATCAGGTG GACAAGGTCA GTTTGCTGAT ATTACAGTCC GGTTTGAGCC ATTGGAAGCA GGATCAGGAT ACGAATTCAA GAGTGAGATT AAAGGAGGAG CTGTGCCAAG AGAGTATATT CCCGGTGTCA TGAAAGGACT TGAGGAGTGT ATGAGCTCCG GTGTGCTTGC TGGTTATCCG GTTGTTGATG TCCGTGCTTG TCTAGTTGAC GGATCTTACC ATGATGTGGA CTCAAGTGTG CTAGCTTTCC AGCTTGCTGC AAGAGGAGCT TTCCGTGAAG GGATGAGGAA AGCGGGTCCG AGAATGCTTG AACCTATCAT GAGAGTTGAA GTTGTTACAC CAGAAGAACA TCTTGGTGAT GTCATTGGTG ATCTTAACTC ACGAAGAGGT CAAATTAACA GCTTCGGAGA CAAACCCGGT GGTCTCAAGG TGGTGGATTC TCTGGTTCCA TTAGCAGAGA TGTTTCAGTA TGTGAGTACA TTGAGAGGGA TGACAAAAGG TCGAGCTTCT TACACAATGC AACTGGCTAA GTTCGATGTT GTTCCTCAGC ATATTCAGAA CAAACTTTCA GACAAAGATC AAGAAGTTAC TGCTTAGAAC AGATTTTGTT TTGCCTACAC TTAAAACTTA TTGTGATTTT GTTTGGTTTA TTATACAGAC ATGTAAGCTA ATCAAATTTG TTATTGTCTT AAAACACATG GATATGAGAA AAAAATTTGA TATATCAGAA AAGTCTGAAA AATGGGACGA ATTCGATCTT AGTGTTTGG |
| Length | 2619 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 1397763.. 1400732 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G62750.1 |
| Description | Translation elongation factor EFG/EF2 protein |
| TAIR curator summary | Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants. |
| Alias | [ATSCO1][ATSCO1/CPEF-G][SCO1][SNOWY COTYLEDON 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg940830 | elongation factor family protein |
| 3 |
Ahg494803 | FtsH extracellular protease family |
| 5.47723 |
Ahg470732 | fructose-2,6-bisphosphatase |
| 7.87401 |
Ahg471430 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 8.7178 |
Ahg933344 | 63 kDa inner membrane family protein |
| 8.94427 |
Ahg471908 | SOUL heme-binding family protein |
| 9 |
Ahg934533 | pyridoxine biosynthesis 1.1 |
| 9.74679 |
Ahg328325 | stress enhanced protein 1 |
| 10.3923 |
Ahg946135 | RAB GTPase homolog E1B |
| 11.3137 |
Ahg490399 | Albino or Glassy Yellow 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|