| Annotation |
|---|
| Description | jgi|Araly1|494802|fgenesh2_kg.8__618__AT5G42310.1 |
| Sequence |
AAGAAGAAGA AGACTATGCT TCTCTTGCAA CAACCTCCAC TGGTTTCATC TCGATTTCAC TCTCTCTACT TCCTCACTCA CCACCACCAC CACCACCACC ACCACCGCTT CTTCCAACCA CCAATCTCTG CTTTCTCTGC AACCACCTCT GCTTCATTAC CTTCACCATC ATCTCCGTCT TCTTCTTACT TCTCCTCATG GAATGGTTTA GATACAAACG AAGAAGACGA TGAATTCTCC TCCGAGGTTC ACCGTCGCTA CGACTTCTCT CCACTTCTAA AATTCCTCTC AAGATTCGGA CCAGTCGAGT TAGTTTTAGA TTCAGAATCG GAATCGGAAT CGGAAGCTTC ACCGGAATCG CTTAATCCGG TGGAGTTCGA GCTCGTCGAG TCATACAGAG CAGTACCAGC ACCATATTGG CACTCATTGA TAAAATCTTT ATGTTCGTCA ACATCATCTC TTGGTTTAGC TTACGCTGTA GTGTCATGGC TACAAAAACA TAACCTCTGT TTCTCCTATG AGCTTCTCTA TTCGATTCTC ATTCACGCGC TTGGCCGTTC GGAGAAGCTT TACGAGGCGT TTCTTCTTTC TCAGAAACAA ACGTTAACAC CATTGACATA CAATGCCTTG ATTGGTGCTT GTGCTCGGAA CAATGATATC GAAAAAGCGC TTAATTTGAT CTCTAGGATG CGTCAAGACG GTTACCAATC CGATTTCGTT AACTATAGCT TGGTTATTCA GTCGTTGACT CGTTGCAATA AGATTGATTC AGTTATGTTG CAGAGATTGT ATAAAGAGAT TGAAAGAGAT AAGCTTGAGC TTGATGTGCA GTTAGTTAAT GATATTATTA TGGGTTTTGC TAAATCTGGT GACCCTTCTC GGGCTTTGCA GCTTCTTGGT ATGGCTCAAG CGACGGGTTT GAGTGCGAAA ACTGCTACTC TTGTTTCGAT TATTTCGGCG TTGGCGAATT CGGGGAGGAC TTTGGAGGCT GAAGCTTTGT TTGAGGAGTT GAGACAGAGT GGGATTAAGC CTAGAACGAA AGCTTATAAT GCGTTGCTTA AAGGGTATGT GAAGACGGGT CCTTTGAAAG ATGCGGAGTC GATGGTTTCG GAGATGGAGA AGAGAGGTGT TTCGCCTGAT GAACATACGT ATAGTCTGCT TATTGATGCG TATGTGAATG CCGGTAGATG GGAAAGCGCG AGAATTGTGT TGAAAGAGAT GGAAGCTGGT GATGTACAGC CTAATTCTTT TGTTTTCAGC AGACTCTTAG CTGGTTATCG CGATAGAGGT GAGTGGCAAA AGACATTTCA AGTTCTCAAG GAGATGAAGA GTATCGGGGT TAAGCCCGAT AGACAGTTTT ACAACGTGGT GATCGATACA TTTGGGAAGT TTAATTGTCT TGATCATGCG ATGACGACTT TTGATAGAAT GTTAAGCGAG GGGATTGAAC CCGATAGGGT GACTTGGAAT ACGCTTATCG ATTGCCATTG TAAGCATGGT CGGCATATAG TAGCAGAAGA GATGTTTGAG GCAATGGAGA GGCGGGGCTG CTTGCCTTGT GCTACAACTT ATAACATCAT GATAAATAGT TATGGAGATC AAGAAAGATG GGATGATATG AAAAGATTGT TGGGAAAGAT GAAGAGCCAA GGTATACTTC CTAACGTCGT GACACACACA ACACTTGTTG ACGTGTATGG CAAATCCGGT AGGTTCAATG ATGCGATAGA GTGCTTGGAA GAGATGAAGT CAGTTGGGCT GAAACCATCA TCGACCATGT ACAATGCCCT CATCAACGCC TATGCACAAA GGGGTTTATC GGAACAAGCT GTGAATGCAT TTAGAGTAAT GACATCAGAT GGACTAAAGC CGAGTTTATT GGCTCTCAAT TCCCTCATCA ATGCCTTTGG TGAGGATAGA AGAGACGCTG AAGCTTTTGC CGTGTTACAG TACATGAAAG AAAACGGCGT AAAACCAGAC GTGGTCACAT ACACAACACT CATGAAAGCT CTCATTCGTG TTGATAAGTT CCAGAAGGTA CCGGGTGTTT ACGAGGAGAT GATCATGTCA GGATGCAAAC CAGATAGAAA AGCTAGATCC ATGTTACGGT CAGCTCTAAG ATACATGAAG CAGACGTTAA GAGCCTCATA GAAACATAGG AGAACAATGC TACGGTTTTA TCTCGAGCTC AAGTGATCAA ATTTTTCTCG AGCTTATGAT AGCATCTCAC AAGCTCAGGA CAGATATGTA ACACAAACCA CAGTACCACA CATTACAAGA GGAAGTCTTT CATACAAATC CTCACATTCT GTCTATGTAA AGATTCAACC TGTACAAATA TATAACTGTG TTGACCAAAT TGGATCCGGC TACTGTCTGT ACTACAGAGA TCATGTAG |
| Length | 2398 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 6310521.. 6313168 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G42310.1 |
| Description | Pentatricopeptide repeat (PPR-like) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.85565 |
Ahg478142 | RNA binding |
| 14 |
Ahg470077 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 15.9687 |
Ahg471925 | Translation initiation factor 2, small GTP-binding protein |
| 17.4356 |
Ahg322384 | Prolyl oligopeptidase family protein |
| 19.7484 |
Ahg940830 | elongation factor family protein |
| 22.3607 |
Ahg311357 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| 23.9792 |
Ahg478019 | DEA(D/H)-box RNA helicase family protein |
| 26.4575 |
Ahg484330 | Hydroxyproline-rich glycoprotein family protein |
| 28.1425 |
Ahg928035 | Pentatricopeptide repeat (PPR-like) superfamily protein |
| 29.3939 |
Ahg487877 | kinesin like protein for actin based chloroplast movement 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|