Detail



ID : Ahg478272

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478272|fgenesh2_kg.3__973__AT3G09540.1
Sequence
GTTCAGTTGA AACAAAGAGC AATTATATCC CAAAAATACA AAACTGAAAC TGTCCGAAAT TAAATTCAAC ATTTGTTATA AATTAGATAT GGGAAACTTA CATGGCCTTC ACAGATCCCA TCACGGCGGT TCTAATTTTC CCGGCGAATC CTCCAATTCA CCTTTCCCAC CACCATATAC ATCAGCTCCG CCATTCGATC ACCACATGGC GGTGGGACCT TATTGCCACG TAGACTCCAG CCTCCGCTCT CTCGCTGGTA AGGCTGAGGG TTTTGGCCGT GCCGCCGTTG GTGGTCTAAA TGGTCCGATT TGCCACGTCA CTTCTTTAGC TGACGAGGGT CCAGGATCGT TGCGAGAGGC TTGCAAGAGG CCAGAACCGT TATGGATTGT GTTCGATGTG TCGGGAACGA TCAATCTCTC TTCGTTTGTG AGCGTATCAT CGCACACAAC GGTGGACGGA AGAGGACAAA AGGTGAAGAT AACGGGAAAA GGGTTAAGGC TAAAAGAGTG TGAAAACGTT ATAATCTGCA ACCTTGAATT TGAAGGCGGT GTGGGACCAG ACGCAGACGC CATTCAGATC AAACCAAAAT CACACAACAT TTGGATTGAT CGGTGTAGTC TCAAGAATTA CTATGATGGT TTGATCGATA TCACACGAGA AAGCACTGAC ATTACTGTCT CAAGATGCCA TTTCATAAAC CACAACAAGA CGATGTTAAT AGGAGCGGAC ACAAGTCACG TTACGGACCG ATGCATAAGA GTTACGATAC ATCACTGTTT TTTTGACGGT ACACGTCAGC GACACCCTCG CGTTCGCTTT GCAAAAGTCC ATCTATTCAA CAACTACACT CGTCATTGGG CCATTTACGC TGTCGGTGCC GGTGTAGAAT CTCAGATATA TTCTCAGTGC AACATATATG AAGCTAGTGA GAAGAAAACT GTCTTTAAGT ACATCACTGA GAAGGCGGCA GATAAAGAGA AACCCGGAGC TGGATTCGTA AGATCCGAAG GGGATTTGTT TTTGAACGGA GCCAAGTCGT GTCTTAGCCA GGGCGGAGAA CGCTATGTGT TCTCTCCGAC CCAACACTAT TCTGAGTGGA CCGTCGAATC GCCAACCGAG ATACTCAAGA ACTATCTGAA ACACTCGACC GGCTGGCTGA ACATTCCGCT CCCACTAGAC CAACCTCCGA CAACCGGTTA ACTATTGTTA ATGGAAGTGA ATTAAATGGA TCACTTTTGG CAGTACCAAA ATTATATCCC AGTAGTTTCT CCCGCTTCCA CTTAGACAAA CAAATAGGAT TGTCGAATTT TTCCAATTCA AAGTTGAGAT TTTAGTTTCA ACTAATAAAG TTAATGTATA TTTTGAGCTT ATGTGCGCAT GTATGGATTA TCTTTAATTA GATGAATAAC AAGTCTGTGG TGGTTG 
Length1426
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3547313.. 3549688
Download Sequence
A.thaliana
AGI-codeAT3G09540.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.4097 Ahg334956
13.7113 Ahg923649 Cation efflux family protein
26.0768 Ahg489834 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
27.3679 Ahg491320
28.0357 Ahg927111 alcohol dehydrogenase 1
28.4605 Ahg920881
31.0805 Ahg314159 Glycosyl hydrolase superfamily protein
34.0294 Ahg315131 beta vacuolar processing enzyme
35.4119 Ahg926409 conserved peptide upstream open reading frame 28
37.4833 Ahg480346 CBS domain-containing protein with a domain of unknown function (DUF21)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression