Detail



ID : Ahg478294

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478294|fgenesh2_kg.3__995__AT3G09720.1
Sequence
GTAAAACCCA AAATCTGCTC GGCATCTATT CGCCGTCGTC AGTGTCATCG CCGGCGTTTG TTACTATTAT TGCTGCCTTT TCCTCTTCCC CAGAAACGCT CTCTGTCTCT ATCTATGGAG AAAAGCTCCT ATTTTTTGTT TGGTGGAACA AACTTCAATA AGAAGAAGTT TGCTCCAGAT TTTGCTAAGT TTAAGAATTG TACGGAGGAT GATGATTCCA ATAAGAAAGT GAACTTCTTT GTGGAAGAAG AGGACACTGA AGAGCAGGAG GAGAAAGTTA TTGTGTCCTC TAAGAAGAGG AAACGAAGAT CTTCTAATTC CGTGCCAGTT GAAGGATTTG ATGTGTTCAA GAGCTCAAAG AAGGCACTTG CTAAAGGTAA AGCAGAAGAA GGAAACACAA AGAATGATAT TTTAGAAGAT CCCAAGAAGG AACTTAATCG TCAAATAGAG CGAGATGCTT TGTCGAGGAA ACAGTACAAC ATTCATGTTT CCGGTAACAA TATTCCACCT CCGCTTAAAA GCTTTGCAGA GTTATCATCA AGGTATGGCT GTAAAGAATA TATATTACGC AATTTGGCTG AACTAGGATT TAAAGAGCCT ACCCCCATCC AAAGACAGGC TATTCCAGTT CTCCTATCGG GTCGTGAATG CTTTGCCTGT GCTCCGACTG GGTCAGGAAA AACCGTTGCT TTTATTTGTC CCATGCTTAT AAAACTCAAG CGCCCTTCAA CAGATGGAAT AAGAGCAGTT ATCCTTTCTC CTGCTCGGGA ACTGGCTGCC CAAACAGCTA GAGAAGGAAA GAAACTTATT AAAGGAAGCA AGTTCCACAT TAGATTGATG ACTAAACCTC TTGTCAAAAC AGCTGACTTC TCAAAGCTGC GGTGTGATGT TCTCATATCA ACGCCGATGC GGCTGAAAAG AGCAATCAAG GCTAAAAAGA TTGACTTAAG CAAGGTTGAG TACCTTGTCC TTGATGAATC TGACAAGCTG TTTGAGCAGA GCTTGTTAAA GCAGATAGAT TGTGTGGTTA AGGCTTGTTC AAACCCTTCG ATCATACGTT CATTGTTCAG TGCTACTTTG CCCGATTCTG TTGAGGAACT TGCACGTTCC ATAATGCATG ATGCTGTTCG TGTGATCATT GGCCGAAAGA ACACAGCGTC TGAAACCGTC AAGCAAAAGC TGGTTTTTGC TGGAACTGAA GAAGGGAAAC TTCTTGCTCT TCGCCAAAGC TTTGCAGAGA GTCTGAATCC ACCGGTACTG ATCTTTGTAC AAAGCAAAGA ACGAGCAAAG GAACTCTATG ATGAACTGAA ATGTGAAAAC ATCAGAGCCG GGGTCATCCA TTCCGATCTC CCTCCGGGAG AGCGGGAAAA CGCAGTTGAT CAATTCAGAG CGGGCGAAAA ATGGGTTTTG ATAGCTACTG ATGTGATTGC TAGAGGTATG GATTTCAAAG GCATCAACTG CGTGATAAAC TATGATTTCC CGGATTCAGC TTCTGCATAC ATCCACAGGA TTGGTCGGTC TGGGAGAGCG GGAAGGAGCG GAGAAGCGAT AACTTTCTAC ACGGAACAGG ATGTACCTTT CCTTAGGAAC ATAGCCAACA TGATGATGTC ATCAGGCTGT GAGGTTCCGT CGTGGATCAT GTCTTTGAAG AAGAAGAAGT GGAGGAAGCA TAGGCCGAGA CGTGATTCTA TATCTACTCA ACCAAAAGCC GATAAAAACG ATAAAGATGT GTAACTTCAA ATTTTGTGTT TTCCTTATCT TGTTGTTGTT ACATTGATGA ATTAGTCTTG GTCTTTCGGA CCCAAACACT TTACAGTATG TGGCTAGAAT CGAACGTAGT TGTCACTTGG ATCGTACTAC AAAATACATA TATGTACTAA AACTAGTTAC TATCCGATTT TGAGACTTCA AGGTTTTTCA TTTTGATGTA TTCTCAGATT CAATGATTTC TTAAGATACA TACAATATAC CATAAGTTTT GGTTTGGTAT AATTTT 
Length1996
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3616218.. 3619484
Download Sequence
A.thaliana
AGI-codeAT3G09720.1
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.2956 Ahg486159 homologue of NAP57
10.3923 Ahg495674 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
16 Ahg487428 RNA binding (RRM/RBD/RNP motifs) family protein
16.6132 Ahg474417 Ribosomal RNA processing Brix domain protein
17.6635 Ahg324031 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)
18.4391 Ahg904129 Nascent polypeptide-associated complex (NAC), alpha subunit family protein
19.6214 Ahg470958 Ribosomal L18p/L5e family protein
21.5639 Ahg938244 Ribosomal protein L11 family protein
22.0907 Ahg928085 NOP56-like pre RNA processing ribonucleoprotein
25.4951 Ahg479925 KRR1 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression