| Annotation |
|---|
| Description | jgi|Araly1|486159|fgenesh2_kg.5__2151__AT3G57150.1 |
| Sequence |
GCTACAACTT TTTACGCCTC CTCCTCCATT TTTCAAAACC CTAATCCAGC CGGAGCCATG GCGGAGGTCG AAATCTCACA CTCGGAGAAG AAGAAGCAAG GCAAGACGGA GAACGATGCC GCCGACACCG GAGACTACAT GATCAAGCCA CAGAGCTTCA CTCCCGCCAT CGACACTTCT CAGTGGCCCA TCCTCCTCAA GAACTACGAC CTCCTCAACG TCCGTACCGG TCACTACACT CCAATCAGCG CCGGTTACTC TCCTCTGAAG CGTCCTCTTC AAGAGTATAT CAGGTACGGT GTCATCAATC TTGATAAACC CGCGAACCCT TCTTCTCACG AGGTCGTTGC TTGGATTAAG CGTATCCTCC GTGTCGAGAA AACGGGTCAC AGTGGTACTC TTGACCCGAA AGTCACTGGA AACCTCATTG TCTGTATTGA CCGAGCCACA CGGCTTGTGA AATCGCAGCA AGGTGCGGGT AAAGAGTACG TTTGTGTTGC TCGGCTTCAC TCTGCTGTCC CTGATGTTGC TAAAGTGGCT AGAGCTCTTG AATCGCTCAC TGGAGCTGTC TTTCAGAGGC CTCCTTTGAT CTCTGCTGTT AAAAGACAGC TTAGAATTAG GACAATCTAT GAAAGCAAGC TGCTTGAGTA TGATGCTGAT AGGCATTTGG TTGTTTTCTG GGTTTCTTGT GAGGCGGGTA CTTACATTAG GACTATGTGT GTTCACTTGG GTTTGCTTCT TGGGGTTGGT GGGCATATGC AGGAGCTTAG GAGGGTTAGG TCTGGGATTT TGGGTGAGAA TGATAACATG GTTACTATGC ATGATGTGAT GGATGCCCAG TTTGTGTATG ACAATTCCAG GGATGAGTCT TATCTTAGGA GGGTGATTAT GCCTCTTGAG GTGATATTGA CGAGTTACAA GAGACTTGTT GTCAAGGATT CTGCTGTGAA TGCTATCTGC TATGGTGCTA AGTTGATGAT TCCCGGGTTG TTGAGATTCG AGAATGACAT TGATGTTGGT ACTGAAGTTG TTCTTATGAC GACCAAGGGT GAGGCGATTG CTGTTGGGAT TGCTGAGATG ACGACATCTG TGATGGCTAC TTGTGATCAC GGTGTGGTAG CTAAGATCAA ACGTGTGGTG ATGGATAGAG ATACTTACCC AAGGAAGTGG GGATTGGGAC CAAGGGCTTC GATGAAGAAG AAGCTAATTG CTGATGGGAA ATTGGATAAG CACGGGAAGC CTAATGAGAA AACTCCGGTT GAGTGGAGCA GGAATGTGGT TTTGCCTACC GGCGGAGATG CTATTATTGC TGGTGCTGCT GCTGCTCCTG TGGAGATAAA TGCTGAGACT GAGAATGGAG AAGCAGGGGA AGCGCGTAAG CGTAAGCATG ATGATAGCAG TGATAGCCCT GCTCCTGTAT CAACCAAGAA ATCTAAAACC AAAGAAGTTG AAGGAGACGA GGCTGAAGAG AAGGTAAAGT CTTCTAAGAA GAAGAAGAAG AAGGATAAGG GAGAGGAGAA AGAAGAGGAA GTTGGGTCTG AGAAGAAGGA AAAGAAGAAG AAGAAAGATA AGAAGGAAGA GGTTAAAGAA GAGGTAGCTT CGCCAAAGTC TGAGAAGAAG AAGAAAAAGA AGAGCAAGGA CACAGAAGCT GCTGTTGACT CAGAAGATGA GAAGAGTGAG AAGAAAAAGA AAAAGAAGGA TAAGAAGAAG AAGAACAAAG ACAGTGAGGA TGATGAGGAA TGAGATGGGT TTGTGTTATG GTGCTATTTT AAGTTTTGAA CTCTTTTGAT TTTGTGGTAT CTATCTACTC TGGAACAAAG TGAGACAAAA GGCATTTTAT GCTTGTATTC TACGTCTCAC TTACGTTTAC CAGTTTTTAT GTTTTTGTAA GGTTAGTTTC AGTTCTAAGC AGATTCTCCC TTTAGATATA TGACTATGGT CTCTCTCTCT CTCTCTCTGT TTTTGGTCTT TACCCTTCTT GTTTGTCTGT TTG |
| Length | 1993 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 17275299.. 17277287 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G57150.1 |
| Description | homologue of NAP57 |
| TAIR curator summary | Encodes a putative pseudouridine synthase (NAP57). |
| Alias | [AtCBF5][AtNAP57][CBF5][NAP57][homologue of NAP57] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg474037 | nucleolin like 1 |
| 1.41421 |
Ahg474678 | homolog of nucleolar protein NOP56 |
| 2 |
Ahg928085 | NOP56-like pre RNA processing ribonucleoprotein |
| 2.44949 |
Ahg492297 | FK506 BINDING PROTEIN 53 |
| 3.4641 |
Ahg477645 | H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein |
| 4.47214 |
Ahg496396 | DEAD box RNA helicase (PRH75) |
| 5.56776 |
Ahg489610 | NOP56-like pre RNA processing ribonucleoprotein |
| 6 |
Ahg339148 | |
| 6.40312 |
Ahg495674 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 7.07107 |
Ahg478548 | RNA binding;RNA binding |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|